RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ZNF354CQ86Y25 554 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 BBS5Q8N3I7 341 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 GPR150Q8NGU9 434 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 DNAJB14Q8TBM8 379 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 FNDC8Q8TC99 324 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 RSPH1Q8WYR4 309 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 TEX37Q96LM6 180 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 DCUN1D5Q9BTE7 237 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 TRIM54Q9BYV2 358 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 ZYG11BQ9C0D3 744 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 TFB2MQ9H5Q4 396 aaKnown RBP18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 TMEM248Q9NWD8 314 aa18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 FAF1Q9UNN5 650 aaPredicted RBP18.24■□□□□ 0.51
PCDHA1-202ENST00000394633 F8W810 466 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 TMX2-CTNND1H3BSU7 103 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 CLOCKO15516 846 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 IDO1P14902 403 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 NCK1P16333 377 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 EEF1DP29692 281 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 ZFP36L2P47974 494 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 TSPY1Q01534 308 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 CLCQ05315 142 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 NFYCQ13952 458 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 MS4A13Q5J8X5 152 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 DUS1LQ6P1R4 473 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 MRPL10Q7Z7H8 261 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 OFCC1Q8IZS5 231 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 OR13C4Q8NGS5 318 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 BLOC1S5Q8TDH9 187 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 VPS33AQ96AX1 596 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 AARSD1Q9BTE6 412 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 PLGRKTQ9HBL7 147 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 POPDC3Q9HBV1 291 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 IKZF3Q9UKT9 509 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 OGDHLQ9ULD0 1010 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 TLR6Q9Y2C9 796 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 FADS3Q9Y5Q0 445 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 OAS3Q9Y6K5 1087 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 ANKRD12Q6UB98 2062 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 RPLP2P05387 115 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 OR4Q2P0C623 313 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 C7P10643 843 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 RFC2P35250 354 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 SCNN1BP51168 640 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 PMS2P3Q13401 168 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 SPATS1Q496A3 300 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 FBXO48Q5FWF7 155 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 MSANTD2Q6P1R3 559 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 PTRH1Q86Y79 214 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 FAM126BQ8IXS8 530 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 THEM5Q8N1Q8 247 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 HIPK3Q9H422 1215 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 ALG2Q9H553 416 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 CD320Q9NPF0 282 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 SEMA4BQ9NPR2 832 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 ZNHIT2Q9UHR6 403 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 CDH7Q9ULB5 785 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 TIMM22Q9Y584 194 aa18.23■□□□□ 0.51
PCDHA1-202ENST00000394633 A0A1W2PP18 115 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SUPT3HB4E1H0 165 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SUPT3HO75486 399 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 ATE1O95260 518 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 PRR35P0CG20 571 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 PRSS56P0CW18 603 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 FCGR1AP12314 374 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 CAPGP40121 348 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 MNX1P50219 401 aaPredicted RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 ATN1P54259 1190 aaPredicted RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 LIPEQ05469 1076 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 TNK2Q07912 1038 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 LCP2Q13094 533 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 DSC3Q14574 896 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 PAGE3Q5JUK9 113 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 MRNIPQ6NTE8 343 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 ELMSAN1Q6PJG2 1045 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 CROCCP3Q8IVE0 287 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SCN4BQ8IWT1 228 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 ADAM2Q99965 735 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 CXorf21Q9HAI6 301 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 KERAO60938 352 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 RPP40O75818 363 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 HOXB8P17481 243 aaPredicted RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SOX11P35716 441 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 TBX4P57082 545 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 RCAN2Q14206 197 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 GALNT3Q14435 633 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 CYBRD1Q53TN4 286 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SDHAF4Q5VUM1 108 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 OGFOD2Q6N063 350 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 ABRAXAS1Q6UWZ7 409 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 CPNE9Q8IYJ1 553 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 DHRSXQ8N5I4 330 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 PAPD5Q8NDF8 572 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 IGSF8Q969P0 613 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SEMA3CQ99985 751 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 KCTD14Q9BQ13 255 aaPredicted RBP18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SEZ6LQ9BYH1 1024 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 MUC13Q9H3R2 512 aa18.22■□□□□ 0.51
PCDHA1-202ENST00000394633 SOX17Q9H6I2 414 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms