RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PPFIBP2Q8ND30 876 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 CYB5D2Q8WUJ1 264 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 BIRC8Q96P09 236 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 ERVK-6Q9BXR3 956 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 EBF2Q9HAK2 575 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 WNT6Q9Y6F9 365 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 FNDC1Q4ZHG4 1894 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 PGLSO95336 258 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 ACVR1Q04771 509 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 SLC34A1Q06495 639 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 WLSQ5T9L3 541 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 PAOXQ6QHF9 649 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 EGFL8Q99944 293 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 SLC39A3Q9BRY0 314 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 MMADHCQ9H3L0 296 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-203ENST00000394269 MED16Q9Y2X0 877 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 INSL6Q9Y581 213 aa11.06□□□□□ -0.64
TCOF1-203ENST00000394269 PIP5K1BO14986 540 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 MTX2O75431 263 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 WFS1O76024 890 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CDK14O94921 469 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 LMNAP02545 664 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 MTHFD2P13995 350 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 EPCAMP16422 314 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 FASTKQ14296 549 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 TRMT5Q32P41 509 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 FAM91A1Q658Y4 838 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ALG1LQ6GMV1 187 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 GRASPQ7Z6J2 395 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 GPSM1Q86YR5 675 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 C12orf76Q8N812 135 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 NRG4Q8WWG1 115 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.05□□□□□ -0.643e-9■■■■■ 78.5
TCOF1-203ENST00000394269 CEP295NLQ96MC4 621 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ZNF570Q96NI8 536 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 HGH1Q9BTY7 390 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 EMILIN2Q9BXX0 1053 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ATP13A3Q9H7F0 1226 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 RC3H2Q9HBD1 1191 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 IL17CQ9P0M4 197 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ZMYM5Q9UJ78 669 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 OR51B4Q9Y5P0 310 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PSMD12O00232 456 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 NVLO15381 856 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 SLC25A14O95258 325 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 IGSF6O95976 241 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ATP5BP06576 529 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CES1P23141 567 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 DNAJB1P25685 340 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 RFC2P35250 354 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PIK3CGP48736 1102 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 DNAJB13P59910 316 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ACTR3P61158 418 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 AP2B1P63010 937 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PLIN5Q00G26 463 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CHRNA6Q15825 494 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PITRM1Q5JRX3 1037 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CTSL3PQ5NE16 218 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 UGT3A1Q6NUS8 523 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 NET1Q7Z628 596 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CDYL2Q8N8U2 506 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 GPR150Q8NGU9 434 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 RIN3Q8TB24 985 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PIH1D2Q8WWB5 315 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ALG14Q96F25 216 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 INTS10Q9NVR2 710 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 NMRK1Q9NWW6 199 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 EIF2B4Q9UI10 523 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 POMPQ9Y244 141 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 DNAJC15Q9Y5T4 150 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 MYLKQ15746 1914 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 BRWD1Q9NSI6 2320 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 GRXCR1A8MXD5 290 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 RAP1GDS1P52306 607 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CLCQ05315 142 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 TNK2Q07912 1038 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 SETMARQ53H47 684 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 SGO1Q5FBB7 561 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 LY6G5CQ5SRR4 150 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ANKS6Q68DC2 871 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 Q6ZNB5 142 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 DPY19L3Q6ZPD9 716 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 LRRC74BQ6ZQY2 392 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ZSWIM9Q86XI8 627 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 CLYBLQ8N0X4 340 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 TTC30BQ8N4P2 665 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 C19orf60Q96EN9 201 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 MRPL1Q9BYD6 325 aaKnown RBP11.05□□□□□ -0.64
TCOF1-203ENST00000394269 WDR41Q9HAD4 459 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 EFCAB1Q9HAE3 211 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 IL26Q9NPH9 171 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 NDE1Q9NXR1 346 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 HSFX1Q9UBD0 423 aa11.05□□□□□ -0.64
TCOF1-203ENST00000394269 ASB1Q9Y576 335 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms