RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TRIB3Q96RU7 358 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 NUSAP1Q9BXS6 441 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 PDFQ9HBH1 243 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 CD320Q9NPF0 282 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 NLE1Q9NVX2 485 aaPredicted RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 TAS2R13Q9NYV9 303 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 GLTPD2A6NH11 291 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 ZNF701M0R085 212 aaPredicted RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 PRDX3P30048 256 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 CTBSQ01459 385 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 RAD51Q06609 339 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 SYVN1Q86TM6 617 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 ZNF598Q86UK7 904 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 IFNEQ86WN2 208 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 GFM2Q969S9 779 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 FUBP1Q96AE4 644 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 FBXL20Q96IG2 436 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 KCTD14Q9BQ13 255 aaPredicted RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 C1QTNF3Q9BXJ4 246 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 IL37Q9NZH6 218 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 EBF1Q9UH73 591 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 CDC7O00311 574 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 EI24O14681 340 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 BAIAP3O94812 1187 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 NDST3O95803 873 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 HMBSP08397 361 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 NCK1P16333 377 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 ZNF140P52738 457 aaPredicted RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 ADARP55265 1226 aaKnown RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 MYBPC3Q14896 1274 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 NFE2Q16621 373 aaPredicted RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 ALG1LQ6GMV1 187 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 GPR180Q86V85 440 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 KIAA2013Q8IYS2 634 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 KLHDC9Q8NEP7 349 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 CYGBQ8WWM9 190 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 BRINP2Q9C0B6 783 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
CBX1-202ENST00000393408 MARCH2Q9P0N8 246 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 ZNF225Q9UK10 706 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 GMEB1Q9Y692 573 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 IQCA1LA6NCM1 817 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 STX16O14662 325 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 KLK8O60259 260 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 SEC24DO94855 1032 aaPredicted RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 IGLV3-27P01718 113 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 SERPINF2P08697 491 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 MAPKAPK2P49137 400 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 GALK1P51570 392 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 EEFSECP57772 596 aaKnown RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 UFM1P61960 85 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 GPR152Q8TDT2 470 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 LZICQ8WZA0 190 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 RPL10LQ96L21 214 aaKnown RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 NPLQ9BXD5 320 aaPredicted RBP18.71■□□□□ 0.59
CBX1-202ENST00000393408 SPO11Q9Y5K1 396 aa18.71■□□□□ 0.59
CBX1-202ENST00000393408 hCG_2014768A0A024R1R8 64 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 TYW5A2RUC4 315 aaKnown RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 NPEPPSL1A6NEC2 478 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 MOXD2PA6NHM9 499 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 SYCE1LA8MT33 242 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 INPPL1O15357 1258 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 CLOCKO15516 846 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 ESRRBO95718 433 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 CLIC3O95833 236 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 RPLP2P05387 115 aaKnown RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 UROSP10746 265 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 AGTR2P50052 363 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 NUP107P57740 925 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 EFL1Q7Z2Z2 1120 aaKnown RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 ZNF280BQ86YH2 543 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 TBC1D21Q8IYX1 336 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 TMEM199Q8N511 208 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 TTC9BQ8N6N2 239 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 LEF1Q9UJU2 399 aaPredicted RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 ANAPC2Q9UJX6 822 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 PCTPQ9UKL6 214 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 FADS3Q9Y5Q0 445 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 CHD5Q8TDI0 1954 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 SLC12A8A0AV02 714 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 FAM92AA1XBS5 289 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 SLC22A3O75751 556 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 UMPSP11172 480 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 VARSP26640 1264 aaKnown RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 CAPGP40121 348 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 NAA20P61599 178 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 FUT11Q495W5 492 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 NADSYN1Q6IA69 706 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 OR2T11Q8NH01 316 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 FBXO32Q969P5 355 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 C12orf43Q96C57 262 aaKnown RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 TMEM74Q96NL1 305 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 GPR21Q99679 349 aa18.7■□□□□ 0.58
CBX1-202ENST00000393408 SMPD3Q9NY59 655 aaPredicted RBP18.7■□□□□ 0.58
CBX1-202ENST00000393408 CCDC154A6NI56 674 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 C1RP00736 705 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 POLR2JP52435 117 aaKnown RBP18.69■□□□□ 0.58
CBX1-202ENST00000393408 PDCD4Q53EL6 469 aaKnown RBP18.69■□□□□ 0.58
CBX1-202ENST00000393408 CYBRD1Q53TN4 286 aa18.69■□□□□ 0.58
CBX1-202ENST00000393408 C10orf120Q5SQS8 335 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms