RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 SYTL3Q4VX76 610 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 UBXN11Q5T124 520 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 KLHDC10Q6PID8 442 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ENPP7Q6UWV6 458 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 Q6ZS52 159 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PHC2Q8IXK0 858 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 MAGED4Q96JG8 741 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 MAELQ96JY0 434 aaKnown RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 LURAP1Q96LR2 239 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 VPS51Q9UID3 782 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 SNX7Q9UNH6 387 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ECM29Q5VYK3 1845 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 DOCK3Q8IZD9 2030 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 TTC26A0AVF1 554 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 QSOX1O00391 747 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 VILLO15195 856 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 PRKCGP05129 697 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ELFN1P0C7U0 828 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 PORP16435 677 aaPredicted RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 MAP4P27816 1152 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CAPZA2P47755 286 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 LRRC63Q05C16 580 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 SEZ6Q53EL9 994 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 TMEM214Q6NUQ4 689 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CRELD2Q6UXH1 353 aaPredicted RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 LRRC55Q6ZSA7 311 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 DESI2Q9BSY9 194 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 OSGEPQ9NPF4 335 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 STX18Q9P2W9 335 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 SCML2Q9UQR0 700 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CSNK1G3Q9Y6M4 447 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 NAV1Q8NEY1 1877 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ZNF840PA6NDX5 716 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 EVPLLA8MZ36 301 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 KCNJ13O60928 360 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 LRRN2O75325 713 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 RFPL1O75677 317 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CASP5P51878 434 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 TNK2Q07912 1038 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 FAM180AQ6UWF9 173 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 C11orf57Q6ZUT1 292 aaPredicted RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 PLCZ1Q86YW0 608 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 LILRB2Q8N423 598 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 GRPEL2Q8TAA5 225 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ROGDIQ9GZN7 287 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 SERTAD3Q9UJW9 196 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 RBMX2Q9Y388 322 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 KCTD3Q9Y597 815 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 HEBP2Q9Y5Z4 205 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ASNA1O43681 348 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 SRGAP2O75044 1071 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ANXA5P08758 320 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ATP5F1P24539 256 aaPredicted RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CNTFP26441 200 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 RPL21P46778 160 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 HAAOP46952 286 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 LEPRP48357 1165 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 KLRB1Q12918 225 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 SPARCL1Q14515 664 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 LACTB2Q53H82 288 aaPredicted RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 WLSQ5T9L3 541 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ALG1LQ6GMV1 187 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 FSTL4Q6MZW2 842 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ERN2Q76MJ5 926 aaKnown RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CHMP1BQ7LBR1 199 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 GALNTL5Q7Z4T8 443 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 MR1Q95460 341 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 ADGRE3Q9BY15 652 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 DUSP16Q9BY84 665 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 CRTAC1Q9NQ79 661 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 UBA2Q9UBT2 640 aaPredicted RBP8.07□□□□□ -1.12
LIMS1-203ENST00000393310 SALL4Q9UJQ4 1053 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 HS3ST3A1Q9Y663 406 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 PLXNB2O15031 1838 aa8.07□□□□□ -1.12
LIMS1-203ENST00000393310 MAP1BP46821 2468 aaKnown RBP8.06□□□□□ -1.12
LIMS1-203ENST00000393310 CCRL2O00421 344 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 MFN2O95140 757 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 HSPA4LO95757 839 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 ADSLP30566 484 aaPredicted RBP8.06□□□□□ -1.12
LIMS1-203ENST00000393310 GMFBP60983 142 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 PPP2R2BQ00005 443 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 DOC2AQ14183 400 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 EDRF1Q3B7T1 1238 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 C5orf22Q49AR2 442 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 ZCWPW2Q504Y3 356 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 PRRT3Q5FWE3 981 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 TAS1R1Q7RTX1 841 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 TP53INP2Q8IXH6 220 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 CPXM2Q8N436 756 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 CCNYL1Q8N7R7 359 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 ANKRD52Q8NB46 1076 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 TMEM161BQ8NDZ6 487 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 TMX3Q96JJ7 454 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.06□□□□□ -1.12
LIMS1-203ENST00000393310 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
LIMS1-203ENST00000393310 SIRPGQ9P1W8 387 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms