RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 OR4L1Q8NH43 312 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 KLHL32Q96NJ5 620 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 PCED1AQ9H1Q7 454 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 C12orf65Q9H3J6 166 aaKnown RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 C6orf106Q9H6K1 298 aaPredicted RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 CAB39LQ9H9S4 337 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 BPIFA1Q9NP55 256 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 SLC17A7Q9P2U7 560 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 RAB23Q9ULC3 237 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 SLC39A10Q9ULF5 831 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 SPAG17Q6Q759 2223 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 C16orf96A6NNT2 1141 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 METTL12A8MUP2 240 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 PLRG1O43660 514 aaKnown RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 GLRA3O75311 464 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 HAUS5O94927 633 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 ASMTLO95671 621 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 MC4RP32245 332 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 LEPRP48357 1165 aaKnown RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 IL9RQ01113 521 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 PDE1CQ14123 709 aaPredicted RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 FASTKD1Q53R41 847 aaKnown RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 CNSTQ6PJW8 725 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 CDHR3Q6ZTQ4 885 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 PARS2Q7L3T8 475 aaKnown RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 LDB1Q86U70 411 aaPredicted RBP13.49□□□□□ -0.25
PTN-202ENST00000393083 GPATCH11Q8N954 259 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 ACVR1CQ8NER5 493 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 OR2T34Q8NGX1 318 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 CKAP2Q8WWK9 683 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 PPP1R16AQ96I34 528 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 ELMO2Q96JJ3 720 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 CABS1Q96KC9 395 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 FAM111AQ96PZ2 611 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 VPS11Q9H270 941 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 CCDC134Q9H6E4 229 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 ZFYVE1Q9HBF4 777 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 IL17CQ9P0M4 197 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 DKK3Q9UBP4 350 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
PTN-202ENST00000393083 TSPAN11A1L157 253 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 NPIPB15A6NHN6 443 aaPredicted RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 H7C0S8 307 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 EPN2O95208 641 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 TOP3BO95985 862 aaKnown RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 MPOP05164 745 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 RETP07949 1114 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 ADRB3P13945 408 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 SAT1P21673 171 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 FOXN2P32314 431 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 CRHR1P34998 444 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 HMGCLP35914 325 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 PLA2G5P39877 138 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 CCT5P48643 541 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 DHPSP49366 369 aaPredicted RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 SEMA3AQ14563 771 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 USP10Q14694 798 aaKnown RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 ZNF789Q5FWF6 425 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 SDCCAG8Q86SQ7 713 aaPredicted RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 OR14C36Q8NHC7 312 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 HCAR2Q8TDS4 363 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 HSPA12BQ96MM6 686 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 LYSMD1Q96S90 227 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 EPN3Q9H201 632 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 RABEP2Q9H5N1 569 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 DYRK4Q9NR20 520 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 FNDC3AQ9Y2H6 1198 aaKnown RBP13.48□□□□□ -0.25
PTN-202ENST00000393083 PPIL1Q9Y3C6 166 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 THADAQ6YHU6 1953 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
PTN-202ENST00000393083 BPTFQ12830 3046 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 A0A096LPK6 155 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 SPINT1O43278 529 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 CLDN7O95471 211 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 S1PR4O95977 384 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 IGHV4-34P06331 123 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 PRSS56P0CW18 603 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 TIMP2P16035 220 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 POLD2P49005 469 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 STC1P52823 247 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 SEC24CP53992 1094 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 CCDC15Q0P6D6 951 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 CDKN3Q16667 212 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 TYSND1Q2T9J0 566 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 TAF1BQ53T94 588 aaPredicted RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 ZRANB3Q5FWF4 1079 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 PPM1JQ5JR12 505 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 LRRC73Q5JTD7 316 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 RBM20Q5T481 1227 aaKnown RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 PEAR1Q5VY43 1037 aaPredicted RBP13.47□□□□□ -0.25
PTN-202ENST00000393083 LYSMD4Q5XG99 296 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 BRAT1Q6PJG6 821 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 RAPH1Q70E73 1250 aa13.47□□□□□ -0.25
PTN-202ENST00000393083 ARMCX6Q7L4S7 300 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms