RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TTPALQ9BTX7 342 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 FKBPLQ9UIM3 349 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 RAI2Q9Y5P3 530 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 GPR45Q9Y5Y3 372 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 C9JVG2 144 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PFDN6O15212 129 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TIPRLO75663 272 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 CD9P21926 228 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 MC4RP32245 332 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TTPAP49638 278 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 DYNC1I2Q13409 638 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 LSAMPQ13449 338 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 SLC5A9Q2M3M2 681 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 NADK2Q4G0N4 442 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 FBXO48Q5FWF7 155 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 CHST9Q7L1S5 443 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 ERMP1Q7Z2K6 904 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PIANPQ8IYJ0 282 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 METTL25Q8N6Q8 603 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 DDI1Q8WTU0 396 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TSPEARQ8WU66 669 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 CANT1Q8WVQ1 401 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PLD4Q96BZ4 506 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 SLC29A1Q99808 456 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 NOL11Q9H8H0 719 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 SLC52A3Q9NQ40 469 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 CCM2LQ9NUG4 571 aaPredicted RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 CMTM6Q9NX76 183 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TRMT6Q9UJA5 497 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 PCTPQ9UKL6 214 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TIMM22Q9Y584 194 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 MYOCOSA0A1B0GUC4 107 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 A0A1W2PQ45 241 aaPredicted RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 A0A1W2PQY0 241 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 NIPSNAP2O75323 286 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 ESRRBO95718 433 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 TSPAN12O95859 305 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 GALTP07902 379 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 BMP2P12643 396 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 ATP6V1B1P15313 513 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 SELPP16109 830 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 SLC6A2P23975 617 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 AGTR2P50052 363 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 SGSHP51688 502 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 ZNF177Q13360 481 aaPredicted RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 CAPRIN1Q14444 709 aaKnown RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 XKR7Q5GH72 579 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 CTSL3PQ5NE16 218 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 HECTD3Q5T447 861 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 LCN8Q6JVE9 175 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 SYVN1Q86TM6 617 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 CARM1Q86X55 608 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 SIDT2Q8NBJ9 832 aaKnown RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 OVCA2Q8WZ82 227 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 PPWD1Q96BP3 646 aaKnown RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 LRRC58Q96CX6 371 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 ZNF512Q96ME7 567 aaPredicted RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 CIB1Q99828 191 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 TMEM175Q9BSA9 504 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
RFC5-201ENST00000392542 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 AIG1Q9NVV5 245 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 LRFN2Q9ULH4 789 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 PCDHGC4Q9Y5F7 938 aa12.21□□□□□ -0.45
RFC5-201ENST00000392542 A0A1B0GVM2 712 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 ZNF840PA6NDX5 716 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 NCF1BA6NI72 391 aaPredicted RBP12.21□□□□□ -0.46
RFC5-201ENST00000392542 NCF1CA8MVU1 366 aaPredicted RBP12.21□□□□□ -0.46
RFC5-201ENST00000392542 CBX4O00257 560 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 COCHO43405 550 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 NBNO60934 754 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 MLYCDO95822 493 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 KLKB1P03952 638 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 CYBBP04839 570 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 UROSP10746 265 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 NCF1P14598 390 aaPredicted RBP12.21□□□□□ -0.46
RFC5-201ENST00000392542 PRDX3P30048 256 aaKnown RBP12.21□□□□□ -0.46
RFC5-201ENST00000392542 CORO1AP31146 461 aaKnown RBP12.21□□□□□ -0.46
RFC5-201ENST00000392542 CLCN4P51793 760 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 DIO3P55073 304 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 GRIK2Q13002 908 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 INPP5AQ14642 412 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 SPATS1Q496A3 300 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 KLHDC10Q6PID8 442 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 EFHBQ8N7U6 833 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 HGH1Q9BTY7 390 aa12.21□□□□□ -0.46
RFC5-201ENST00000392542 ACTR3BQ9P1U1 418 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms