RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 EIF3HO15372 352 aaKnown RBP eCLIP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 GPR39O43194 453 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 BANF1O75531 89 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 USP1O94782 785 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 ASMTLO95671 621 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 GOT2P00505 430 aaKnown RBP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 CSF2P04141 144 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 CEACAM5P06731 702 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 POLBP06746 335 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 RHOXF2BP0C7M4 288 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 PGAM1P18669 254 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 LAMA1P25391 3075 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 RXRGP48443 463 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 ARRB1P49407 418 aaPredicted RBP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 BLKP51451 505 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 SRP54P61011 504 aaKnown RBP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 TUBB4BP68371 445 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 PPARDQ03181 441 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 PDIA2Q13087 525 aaKnown RBP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 PRAMEF14Q5SWL7 426 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 RIF1Q5UIP0 2472 aaKnown RBP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 ZDHHC24Q6UX98 284 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 MINDY1Q8N5J2 469 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 OR4L1Q8NH43 312 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 FAM122AQ96E09 287 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 RHOXF2Q9BQY4 288 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 EDEM2Q9BV94 578 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 FOXP3Q9BZS1 431 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 VPS18Q9P253 973 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 CRLS1Q9UJA2 301 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 SLC17A4Q9Y2C5 497 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 TMEM98Q9Y2Y6 226 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 TEX264Q9Y6I9 313 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 OAS3Q9Y6K5 1087 aaKnown RBP14.78□□□□□ -0.04
SUMO1-203ENST00000392246 CABIN1Q9Y6J0 2220 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 FAM186AA6NE01 2351 aa14.78□□□□□ -0.04
SUMO1-203ENST00000392246 LRP4O75096 1905 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 A0A1B0GTQ1 180 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 YKT6O15498 198 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 SLU7O95391 586 aaKnown RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 TTC4O95801 387 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 TNFP01375 233 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 NME1P15531 152 aaKnown RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 ELK3P41970 407 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 FASTKD1Q53R41 847 aaKnown RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 ZNF542PQ5EBM4 170 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 GPRC6AQ5T6X5 926 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 KIAA0930Q6ICG6 404 aaPredicted RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 DOK6Q6PKX4 331 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 TAS2R42Q7RTR8 314 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 HID1Q8IV36 788 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 IFT20Q8IY31 132 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 DDHD1Q8NEL9 900 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 IFT81Q8WYA0 676 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 TSACCQ96A04 125 aaPredicted RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 ZNF669Q96BR6 464 aaPredicted RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 FCRL3Q96P31 734 aaPredicted RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 PHACTR1Q9C0D0 580 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 FAM96AQ9H5X1 160 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 FGF22Q9HCT0 170 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 ARFGAP3Q9NP61 516 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 ZDHHC18Q9NUE0 388 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 MOSPD1Q9UJG1 213 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.77□□□□□ -0.04
SUMO1-203ENST00000392246 DGKBQ9Y6T7 804 aa14.77□□□□□ -0.04
SUMO1-203ENST00000392246 TRBV5-4A0A0C4DH59 114 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 PRSS38A1L453 326 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 OR51F1A6NGY5 319 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 GPR89AB7ZAQ6 455 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 H3BM21 787 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 VEGFDO43915 354 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 RASGRP1O95267 797 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 VAPBO95292 243 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 IVLP07476 585 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 GPR89BP0CG08 455 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 JUNDP17535 347 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 FOXN2P32314 431 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 CA5AP35218 305 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 POLD2P49005 469 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 CDKN1CP49918 316 aaPredicted RBP14.76□□□□□ -0.05
SUMO1-203ENST00000392246 HK3P52790 923 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 HNRNPKP61978 463 aaKnown RBP eCLIP14.76□□□□□ -0.05
SUMO1-203ENST00000392246 TMEM115Q12893 351 aaPredicted RBP14.76□□□□□ -0.05
SUMO1-203ENST00000392246 CUL1Q13616 776 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 ALG11Q2TAA5 492 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 HP1BP3Q5SSJ5 553 aaPredicted RBP14.76□□□□□ -0.05
SUMO1-203ENST00000392246 TEX35Q5T0J7 233 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 RD3Q7Z3Z2 195 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 ADGRG6Q86SQ4 1221 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 IGDCC3Q8IVU1 814 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 PHACTR4Q8IZ21 702 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 NXPE1Q8N323 547 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 OR2I1PQ8NGU4 316 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 HEXDCQ8WVB3 486 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 OR1E3Q8WZA6 343 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 SCARF2Q96GP6 870 aaPredicted RBP14.76□□□□□ -0.05
SUMO1-203ENST00000392246 TTC25Q96NG3 672 aa14.76□□□□□ -0.05
SUMO1-203ENST00000392246 TTC1Q99614 292 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms