RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 LRRC73Q5JTD7 316 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 SH2D4BQ5SQS7 431 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 ZNF678Q5SXM1 525 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 RINLQ6ZS11 566 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 FRMD7Q6ZUT3 714 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 GPR26Q8NDV2 337 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 ST13P5Q8NFI4 369 aaPredicted RBP19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 STAG3L4Q8TBR4 150 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 EEF1AKMT1Q8WVE0 214 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 ZFYVE19Q96K21 471 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 ASB16Q96NS5 453 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 BTBD10Q9BSF8 475 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 APOL5Q9BWW9 433 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 NUF2Q9BZD4 464 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 GSTO2Q9H4Y5 243 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 WDR55Q9H6Y2 383 aaPredicted RBP19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 SARS2Q9NP81 518 aaKnown RBP19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 TRBV5-4A0A0C4DH59 114 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 GOLGA8QA0A0J9YX86 632 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 GOLGA8OA6NCC3 632 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 GOLGA8NF8WBI6 632 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 ADH1CP00326 375 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 ZNF7P17097 686 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 LHCGRP22888 699 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 FSHRP23945 695 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 RARS2Q5T160 578 aaKnown RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 LONP2Q86WA8 852 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 KIAA1958Q8N8K9 716 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 BPIFB1Q8TDL5 484 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 NAT14Q8WUY8 206 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 FGF13Q92913 245 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 TTC1Q99614 292 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 MIPEPQ99797 713 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 HEPHQ9BQS7 1158 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 BOCQ9BWV1 1114 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 LMAN2LQ9H0V9 348 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 IGFLR1Q9H665 355 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 EML4Q9HC35 981 aaKnown RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 TCF7L2Q9NQB0 619 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 GTSE1Q9NYZ3 720 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 CDH22Q9UJ99 828 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 PCDHB1Q9Y5F3 818 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 KIF26AQ9ULI4 1882 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 EPOPA6NHQ4 379 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 E9PBE3 544 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 CDC7O00311 574 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 HOXC11O43248 304 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 KLHL41O60662 606 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 KERAO60938 352 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 SUPT7LO94864 414 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 TSPAN12O95859 305 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 JUNP05412 331 aaKnown RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 ARSAP15289 507 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 AOC1P19801 751 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 CPA2P48052 419 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 CLCN7P51798 805 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 IL2P60568 153 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 POLR2LP62875 67 aaKnown RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 HERVK_113P63132 956 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 PFKFB4Q16877 469 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 UNC50Q53HI1 259 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 PPP2R2DQ66LE6 453 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 PTGR2Q8N8N7 351 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 ERVK-6Q9BXR3 956 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 OSBPL1AQ9BXW6 950 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 CLPBQ9H078 707 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 MTG2Q9H4K7 406 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 EBF3Q9H4W6 596 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 TAS2R1Q9NYW7 299 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 TAGLN3Q9UI15 199 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 RNF112Q9ULX5 631 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 WASF2Q9Y6W5 498 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 DOCK8Q8NF50 2099 aa19.69■□□□□ 0.74
PDLIM5-205ENST00000380180 A0A1W2PQ67 120 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 GOLGA8CPA6NN73 597 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 NEMP1O14524 444 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 TULP3O75386 442 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 ACRV1P26436 265 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 EPHA3P29320 983 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 PTPN5P54829 565 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 KDSRQ06136 332 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 GALNT1Q10472 559 aaPredicted RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 TSNQ15631 228 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 METTL21CQ5VZV1 264 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 UGT3A1Q6NUS8 523 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 PARP9Q8IXQ6 854 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 CPNE9Q8IYJ1 553 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 RBFAQ8N0V3 343 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 SMARCD2Q92925 531 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 TNFRSF12AQ9NP84 129 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 CRLS1Q9UJA2 301 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 TCF20Q9UGU0 1960 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 BTN3A1O00481 513 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 GYG2O15488 501 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 LEFTY1O75610 366 aa19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 RPS3P23396 243 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 HNRNPH1P31943 449 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 PDCD2Q16342 344 aaPredicted RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 LSM12Q3MHD2 195 aaKnown RBP19.68■□□□□ 0.74
PDLIM5-205ENST00000380180 GPR33Q49SQ1 333 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms