RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CNTN4Q8IWV2 1026 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CDKN2AIPNLQ96HQ2 116 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 GINS4Q9BRT9 223 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 UCK2Q9BZX2 261 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 COPS7BQ9H9Q2 264 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 EXD2Q9NVH0 621 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CACNG1Q06432 222 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 FBRSQ9HAH7 460 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CASS4Q9NQ75 786 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CDH7Q9ULB5 785 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 AP4B1Q9Y6B7 739 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PGRMC2O15173 223 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PRKAR1AP10644 381 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SELPLGQ14242 412 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SMG7Q92540 1137 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TAAR1Q96RJ0 339 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 FANCFQ9NPI8 374 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 GALNT2Q10471 571 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF284Q2VY69 593 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CACFD1Q9UGQ2 172 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PRSS51A0A1B0GVH4 220 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DCDC2CA8MYV0 355 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SLC30A4O14863 429 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DUSP11O75319 330 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SNRPD1P62314 119 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PRKCDQ05655 676 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 RPA4Q13156 261 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 MLIPQ5VWP3 458 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TLDC1Q6P9B6 456 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 RANBP10Q6VN20 620 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 LRRC58Q96CX6 371 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NMUR2Q9GZQ4 415 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SPDYE5A6NIY4 337 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CYP2A6P11509 494 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TSPAN8P19075 237 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DDX6P26196 483 aaKnown RBP eCLIP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ACLYP53396 1101 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ITPK1Q13572 414 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CPNE2Q96FN4 548 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ACTR8Q9H981 624 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SPASTQ9UBP0 616 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SHBGP04278 402 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ZBTB41Q5SVQ8 909 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 AGAP2Q99490 1192 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DCKP27707 260 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NSG1P42857 185 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CD47Q08722 323 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 LRRC17Q8N6Y2 441 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CHID1Q9BWS9 393 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 INPP5EQ9NRR6 644 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PRELID1Q9Y255 219 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PPP5CP53041 499 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ALG11Q2TAA5 492 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 FAM174AQ8TBP5 190 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SALL4Q9UJQ4 1053 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 H0YC42 278 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 RGS10O43665 173 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 RFPL1O75677 317 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 BMP1P13497 986 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ARPC4P59998 168 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CDKL1Q00532 357 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF311Q5JNZ3 666 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CAPN12Q6ZSI9 719 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 FNDC5Q8NAU1 212 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 APBA2Q99767 749 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CRYL1Q9Y2S2 319 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NUDT19A8MXV4 375 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 MTMR2Q13614 643 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DCP2Q8IU60 420 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NRSN1Q8IZ57 195 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PDSS2Q86YH6 399 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 C10orf82Q8WW14 230 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TKTL2Q9H0I9 626 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 POLR1BQ9H9Y6 1135 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NEUROD4Q9HD90 331 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ARL15Q9NXU5 204 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 MICAL2O94851 1124 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF432O94892 652 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 KIR3DL1P43629 444 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 RPL34P49207 117 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 VBP1P61758 197 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ADGRF1Q5T601 910 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 EFCAB11Q9BUY7 163 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SNX15Q9NRS6 342 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 GIPC3Q8TF64 312 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 OR1G1P47890 313 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 LCN8Q6JVE9 175 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 OR2B2Q9GZK3 357 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 MTFR1LQ9H019 292 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SIX4Q9UIU6 781 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 RNASEH2AO75792 299 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SOX9P48436 509 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ABHD18Q0P651 414 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM35AQ53FP2 167 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 KLHL26Q53HC5 615 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 GALNT12Q8IXK2 581 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 C8orf48Q96LL4 319 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 EDNRBP24530 442 aa4.9□□□□□ -1.62
PCDH9-201ENST00000377861 INHBCP55103 352 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms