RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 FIG4Q92562 907 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 NCLNQ969V3 563 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 LRRC58Q96CX6 371 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 TCF12Q99081 682 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 AARSD1Q9BTE6 412 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 TRIM15Q9C019 465 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 INTS7Q9NVH2 962 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 SEPT3Q9UH03 358 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 AGO1Q9UL18 857 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 SBF1O95248 1867 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 SLC22A2O15244 555 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 SEPT4O43236 478 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ALPIP09923 528 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 TYMPP19971 482 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 GPX3P22352 226 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 HMOX2P30519 316 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 OR1D2P34982 312 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ATP5C1P36542 298 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 SLC11A2P49281 568 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 STC1P52823 247 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 LCP2Q13094 533 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 PAGE3Q5JUK9 113 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 NADSYN1Q6IA69 706 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 CYHR1Q6ZMK1 362 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ARHGAP22Q7Z5H3 698 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 RANBP9Q96S59 729 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 PKMYT1Q99640 499 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 TRMOQ9BU70 441 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 MRM3Q9HC36 420 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 RAI2Q9Y5P3 530 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ARPC2O15144 300 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 SLC2A4P14672 509 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 SLC6A4P31645 630 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 GALK1P51570 392 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 FCGRTP55899 365 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 IL2P60568 153 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 FBXO30Q8TB52 745 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 SLC39A13Q96H72 371 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 OSBPL11Q9BXB4 747 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ING2Q9H160 280 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 ALG2Q9H553 416 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 POLR3BQ9NW08 1133 aaPredicted RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 CMTM6Q9NX76 183 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 FCF1Q9Y324 198 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 ASB1Q9Y576 335 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 KANSL1LA0AUZ9 987 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 TBKBP1A7MCY6 615 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 SH3BGRLO75368 114 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 CYBBP04839 570 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 LSAMPQ13449 338 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 RFTN1Q14699 578 aaPredicted RBP12.83□□□□□ -0.36
USP11-204ENST00000377107 ATP6AP1LQ52LC2 224 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 SYVN1Q86TM6 617 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 UROC1Q96N76 676 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 PRDM5Q9NQX1 630 aaPredicted RBP12.83□□□□□ -0.36
USP11-204ENST00000377107 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.36
USP11-204ENST00000377107 S100BP04271 92 aaPredicted RBP12.83□□□□□ -0.36
USP11-204ENST00000377107 CKBP12277 381 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 MTHFD2P13995 350 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 FDXRP22570 491 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 GSK3BP49841 420 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 PLD1Q13393 1074 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 GRM2Q14416 872 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 PARP15Q460N3 678 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 RTP2Q5QGT7 225 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 RASAL3Q86YV0 1011 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 FAM126BQ8IXS8 530 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 Q9Y3F1 56 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 PKP3Q9Y446 797 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 MROH6A6NGR9 719 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 PRAMEF11O60813 436 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 SLC22A3O75751 556 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 H6PDO95479 791 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 CAPN1P07384 714 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 PKMP14618 531 aaKnown RBP12.83□□□□□ -0.36
USP11-204ENST00000377107 NR4A1P22736 598 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 HOXC13P31276 330 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 FKBP1BP68106 108 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 STK32CQ86UX6 486 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
USP11-204ENST00000377107 DDI1Q8WTU0 396 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP11-204ENST00000377107 ARNT2Q9HBZ2 717 aa12.83□□□□□ -0.36
USP11-204ENST00000377107 HTTP42858 3142 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms