RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 LDLRAP1Q5SW96 308 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 KIAA0930Q6ICG6 404 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-201ENST00000374673 AFTPHQ6ULP2 937 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 ZDHHC24Q6UX98 284 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 TRIM74Q86UV6 250 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PHACTR4Q8IZ21 702 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 HDAC10Q969S8 669 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 ULK4Q96C45 1275 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PDXPQ96GD0 296 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 SCARF2Q96GP6 870 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PWWP2AQ96N64 755 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 NAT9Q9BTE0 207 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 FAM129AQ9BZQ8 928 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PHACTR1Q9C0D0 580 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A7Q9HAW7 530 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A10Q9HAW8 530 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A8Q9HAW9 530 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 IL21RQ9HBE5 538 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 EPB41L5Q9HCM4 733 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 TRIM39Q9HCM9 518 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 TMEM9BQ9NQ34 198 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 FAM114A2Q9NRY5 505 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 KLF15Q9UIH9 416 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 CRLS1Q9UJA2 301 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 MAD1L1Q9Y6D9 718 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 OAS3Q9Y6K5 1087 aaKnown RBP14.88□□□□□ -0.03
HSPG2-201ENST00000374673 DGKBQ9Y6T7 804 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 GPR89AB7ZAQ6 455 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 H3BM21 787 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 EIF3HO15372 352 aaKnown RBP eCLIP14.87□□□□□ -0.039e-8■■■■□ 22.7
HSPG2-201ENST00000374673 BANF1O75531 89 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 RASGRP1O95267 797 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 ASMTLO95671 621 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 GOT2P00505 430 aaKnown RBP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 IVLP07476 585 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 GPR89BP0CG08 455 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 PGAM1P18669 254 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 PAMP19021 973 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 EPHA8P29322 1005 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 HK3P52790 923 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 PLTPP55058 493 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 HNRNPKP61978 463 aaKnown RBP eCLIP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 ANKRD20A4Q4UJ75 823 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 ZRANB3Q5FWF4 1079 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 PRAMEF14Q5SWL7 426 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 GPRC6AQ5T6X5 926 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 KCTD16Q68DU8 428 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 CES3Q6UWW8 571 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 CCNJLQ8IV13 435 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 NXPE1Q8N323 547 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 OR2I1PQ8NGU4 316 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 OR4L1Q8NH43 312 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 FBXO25Q8TCJ0 367 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 OR1E3Q8WZA6 343 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 TSACCQ96A04 125 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 ZNF669Q96BR6 464 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 EBNA1BP2Q99848 306 aaKnown RBP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 FOXP3Q9BZS1 431 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 RMI1Q9H9A7 625 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 MRPL40Q9NQ50 206 aaKnown RBP14.87□□□□□ -0.03
HSPG2-201ENST00000374673 TM7SF3Q9NS93 570 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 TMEM98Q9Y2Y6 226 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 TEX264Q9Y6I9 313 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
HSPG2-201ENST00000374673 ZCWPW2A0A1B0GU75 182 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 OR51F1A6NGY5 319 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 VEGFDO43915 354 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 PCDHGA12O60330 932 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 DNAJC6O75061 913 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 PIAS2O75928 621 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 TTC4O95801 387 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 TNFP01375 233 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 FUCA1P04066 466 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 POLBP06746 335 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 JUNDP17535 347 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 ACRV1P26436 265 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 ARNTP27540 789 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 ELK3P41970 407 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 POLD2P49005 469 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 LIMK1P53667 647 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 PDIA2Q13087 525 aaKnown RBP14.86□□□□□ -0.03
HSPG2-201ENST00000374673 KHDC1Q4VXA5 237 aaKnown RBP14.86□□□□□ -0.03
HSPG2-201ENST00000374673 ZNF542PQ5EBM4 170 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 PSAPL1Q6NUJ1 521 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 DOK6Q6PKX4 331 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 MICALCLQ6ZW33 695 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 CENPUQ71F23 418 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 ADGRG6Q86SQ4 1221 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 HID1Q8IV36 788 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 RBFAQ8N0V3 343 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 OR6P1Q8NGX9 317 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 GDAP1Q8TB36 358 aa14.86□□□□□ -0.03
HSPG2-201ENST00000374673 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.86□□□□□ -0.03
HSPG2-201ENST00000374673 FCRL3Q96P31 734 aaPredicted RBP14.86□□□□□ -0.03
HSPG2-201ENST00000374673 WDR83Q9BRX9 315 aaKnown RBP14.86□□□□□ -0.03
HSPG2-201ENST00000374673 TRIM56Q9BRZ2 755 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms