RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 UBDO15205 165 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 TLL1O43897 1013 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 GPC4O75487 556 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 RPSAP08865 295 aaKnown RBP17.75■□□□□ 0.43
CTSA-204ENST00000372484 ARSAP15289 507 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 FUT11Q495W5 492 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 FAM219BQ5XKK7 198 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 UGT3A1Q6NUS8 523 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 CPNE9Q8IYJ1 553 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 RIN3Q8TB24 985 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 RCN3Q96D15 328 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 LMLNQ96KR4 655 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 MRGBPQ9NV56 204 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 SCN8AQ9UQD0 1980 aa17.75■□□□□ 0.43
CTSA-204ENST00000372484 CAPN8A6NHC0 703 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 NCF1BA6NI72 391 aaPredicted RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 NCF1CA8MVU1 366 aaPredicted RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 A8MX80 341 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 NEDD8-MDP1E9PL57 170 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 SORBS2O94875 1100 aaKnown RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 FGF19O95750 216 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 NCF1P14598 390 aaPredicted RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 PTPN2P17706 415 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 DDX6P26196 483 aaKnown RBP eCLIP17.74■□□□□ 0.434e-8■■■□□ 17.6
CTSA-204ENST00000372484 C16orf89Q6UX73 402 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 SERPINA9Q86WD7 417 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 MYLK4Q86YV6 388 aaPredicted RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 HPS6Q86YV9 775 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 DSELQ8IZU8 1212 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 FBXW8Q8N3Y1 598 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 TRPC4APQ8TEL6 797 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 C19orf60Q96EN9 201 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 ASB8Q9H765 288 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 APPL1Q9UKG1 709 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 HS3ST2Q9Y278 367 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 PCDHB1Q9Y5F3 818 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 ATP6AP2A0A1C7CYW4 349 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 GAPDHSO14556 408 aaPredicted RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 ATP6AP2O75787 350 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 FGF4P08620 206 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 EPHA5P54756 1037 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 NFATC2Q13469 925 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 UGT3A2Q3SY77 523 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 ARHGAP15Q53QZ3 475 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 FBXO48Q5FWF7 155 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 TMEM240Q5SV17 173 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 CYHR1Q6ZMK1 362 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 ZSWIM9Q86XI8 627 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 EFCAB3Q8N7B9 438 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 SP7Q8TDD2 431 aaPredicted RBP17.74■□□□□ 0.43
CTSA-204ENST00000372484 TTC1Q99614 292 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 CLPBQ9H078 707 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 IL26Q9NPH9 171 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 TDP1Q9NUW8 608 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 DNAJC15Q9Y5T4 150 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 CHD7Q9P2D1 2997 aa17.74■□□□□ 0.43
CTSA-204ENST00000372484 GOLGA8CPA6NN73 597 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 GRM6O15303 877 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 RHOP08100 348 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 ZNF7P17097 686 aaPredicted RBP17.73■□□□□ 0.43
CTSA-204ENST00000372484 ITGALP20701 1170 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 CLCN7P51798 805 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 MTTPP55157 894 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 CLCQ05315 142 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 LCP2Q13094 533 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 CDKN3Q16667 212 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 MYLK3Q32MK0 819 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 ANKS6Q68DC2 871 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 PTRHD1Q6GMV3 140 aaKnown RBP17.73■□□□□ 0.43
CTSA-204ENST00000372484 C22orf39Q6P5X5 142 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 SNX20Q7Z614 316 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 SPPL3Q8TCT6 385 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 C19orf43Q9BQ61 176 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 BBS2Q9BXC9 721 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 EFCAB1Q9HAE3 211 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 SEMA4BQ9NPR2 832 aaPredicted RBP17.73■□□□□ 0.43
CTSA-204ENST00000372484 MCM8Q9UJA3 840 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 SLC25A13Q9UJS0 675 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 WASF2Q9Y6W5 498 aa17.73■□□□□ 0.43
CTSA-204ENST00000372484 ZNF106Q9H2Y7 1883 aaKnown RBP17.73■□□□□ 0.43
CTSA-204ENST00000372484 PRRC2BQ5JSZ5 2229 aaKnown RBP17.73■□□□□ 0.43
CTSA-204ENST00000372484 CXorf51AA0A1B0GTR3 108 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 AZIN1O14977 448 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 MOSPD3O75425 235 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 BPIP17213 487 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 GCKP35557 465 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 AP2B1P63010 937 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 ART3Q13508 389 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 SQLEQ14534 574 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 TCHHL1Q5QJ38 904 aaPredicted RBP17.72■□□□□ 0.43
CTSA-204ENST00000372484 ASTLQ6HA08 431 aaPredicted RBP17.72■□□□□ 0.43
CTSA-204ENST00000372484 LARP4Q71RC2 724 aaKnown RBP eCLIP17.72■□□□□ 0.434e-10■■■□□ 14.8
CTSA-204ENST00000372484 GPSM1Q86YR5 675 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 GRIN3AQ8TCU5 1115 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 ISG20Q96AZ6 181 aaKnown RBP17.72■□□□□ 0.43
CTSA-204ENST00000372484 C3orf30Q96M34 536 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 ANKRD27Q96NW4 1050 aa17.72■□□□□ 0.43
CTSA-204ENST00000372484 POMPQ9Y244 141 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms