RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DUX4L2P0CJ85 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DUX4L3P0CJ86 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DUX4L4P0CJ87 422 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DUX4L5P0CJ88 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DUX4L6P0CJ89 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DUX4L7P0CJ90 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 KELP23276 732 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TNK2Q07912 1038 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF155Q12901 538 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 QPCTQ16769 361 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ALG11Q2TAA5 492 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TMEM220Q6QAJ8 160 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DHDDSQ86SQ9 333 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 HDDC3Q8N4P3 179 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DEFB119Q8N690 84 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 XAGE5Q8WWM1 108 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF184Q99676 751 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 AIF1LQ9BQI0 150 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 MMADHCQ9H3L0 296 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DNAJC11Q9NVH1 559 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 EHD3Q9NZN3 535 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DUX4Q9UBX2 424 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 AJAP1Q9UKB5 411 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 MT-ND1P03886 318 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 PRNPP04156 253 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CHRNB2P17787 502 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CASP9P55211 416 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 DAOAP59103 153 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 C2orf80Q0P641 193 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 ACMSDQ8TDX5 336 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 AGAP11Q8TF27 550 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 CRISPLD1Q9H336 500 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
PTPRK-207ENST00000368226 IPPKQ9H8X2 491 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
PTPRK-207ENST00000368226 EME2A4GXA9 379 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 IDO1P14902 403 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 RPIAP49247 311 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 JAM2P57087 298 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 RPS24P62847 133 aaKnown RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 ANKRD46Q86W74 232 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 CADM2Q8N3J6 435 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 RDH11Q8TC12 318 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TWIST2Q8WVJ9 160 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SLIT3O75094 1523 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 UNC5CO95185 931 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 PGM3O95394 542 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 BPGMP07738 259 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 BMP7P18075 431 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 WARSP23381 471 aaKnown RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 ELP6Q0PNE2 266 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 AMZ1Q400G9 498 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 ENKURQ8TC29 256 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 CLPTM1LQ96KA5 538 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SPATA5L1Q9BVQ7 753 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TXNRD2Q9NNW7 524 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 STATHP02808 62 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SERPINA6P08185 405 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 GATMP50440 423 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 HSPB3Q12988 150 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 RFX4Q33E94 735 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SYPL2Q5VXT5 272 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SLC26A9Q7LBE3 791 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 RP9Q8TA86 221 aaKnown RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SH3RF2Q8TEC5 729 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 HMGB4Q8WW32 186 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 DNASE1L2Q92874 299 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 GAL3ST4Q96RP7 486 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 ROBO1Q9Y6N7 1651 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 OR51F1A6NGY5 319 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 CENPXA8MT69 81 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 MAP2K7O14733 419 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TIPRLO75663 272 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 DRD4P21917 467 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 CCNCP24863 283 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 PBX1P40424 430 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 YAP1P46937 504 aaKnown RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SLC20A2Q08357 652 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SOWAHAQ2M3V2 549 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 VPS26BQ4G0F5 336 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 UBXN11Q5T124 520 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TRIM40Q6P9F5 258 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 AMIGO3Q86WK7 504 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SPPL2CQ8IUH8 684 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SLC43A3Q8NBI5 491 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 KCT2Q8NC54 265 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 GSTCDQ8NEC7 633 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 LRTM1Q9HBL6 345 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 INTS7Q9NVH2 962 aaKnown RBP12.82□□□□□ -0.36
PTPRK-207ENST00000368226 ADGRE2Q9UHX3 823 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 TCAF1Q9Y4C2 921 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 SUV39H1O43463 412 aa12.82□□□□□ -0.36
PTPRK-207ENST00000368226 AP2A1O95782 977 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms