RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ZNF366Q8N895 744 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 ST13P5Q8NFI4 369 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-203ENST00000368207 FEM1CQ96JP0 617 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 C8orf48Q96LL4 319 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 SEZ6LQ9BYH1 1024 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 RNF186Q9NXI6 227 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 PSME2Q9UL46 239 aa12.24□□□□□ -0.45
PTPRK-203ENST00000368207 SCAMP1O15126 338 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ATG13O75143 517 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 OR4F21O95013 312 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 PRNPP04156 253 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CHRNGP07510 517 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 NTSP30990 170 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 LSM12Q3MHD2 195 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 RAB6CQ53S08 254 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ZCCHC8Q6NZY4 707 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ARHGAP36Q6ZRI8 547 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 TADA1Q96BN2 335 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 RAB6CQ9H0N0 254 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 C11orf49Q9H6J7 331 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CNTN6Q9UQ52 1028 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 TEX264Q9Y6I9 313 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 FAM72CH0Y354 149 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CACNB4O00305 520 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 FAM20BO75063 409 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CNOT3O75175 753 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 TNFAIP8O95379 198 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 HNRNPCP07910 306 aaKnown RBP eCLIP12.23□□□□□ -0.455e-7■■□□□ 13
PTPRK-203ENST00000368207 ALPIP09923 528 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 GNPDA1P46926 289 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 LCP2Q13094 533 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 PAFAH1B3Q15102 231 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 VPS26BQ4G0F5 336 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 FAM72AQ5TYM5 149 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 FAM72DQ6L9T8 149 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 FAM72BQ86X60 149 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CFAP206Q8IYR0 622 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 TCF12Q99081 682 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 EBF4Q9BQW3 602 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 MYRFQ9Y2G1 1151 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 GUCY1B2O75343 617 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 GSNP06396 782 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ANXA6P08133 673 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CNKSR3Q6P9H4 555 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 C14orf80Q86SX3 495 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ADHFE1Q8IWW8 467 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 OR14C36Q8NHC7 312 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ZNF395Q9H8N7 513 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 DNAJC11Q9NVH1 559 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 PRPF19Q9UMS4 504 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 DHRS12A0PJE2 317 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 GSAPA4D1B5 854 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 TCEA3O75764 348 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 VAV1P15498 845 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 IDH2P48735 452 aaKnown RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 TAF1AQ15573 450 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-203ENST00000368207 MS4A13Q5J8X5 152 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 IL23RQ5VWK5 629 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 IRGCQ6NXR0 463 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CMTM8Q8IZV2 173 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 CPA6Q8N4T0 437 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 ZNF461Q8TAF7 563 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 RTKNQ9BST9 563 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 DCUN1D5Q9BTE7 237 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 SGK2Q9HBY8 427 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 FETUBQ9UGM5 382 aa12.23□□□□□ -0.45
PTPRK-203ENST00000368207 NIPSNAP2O75323 286 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ESR1P03372 595 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PABPC1P11940 636 aaKnown RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PTGER3P43115 390 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 GALNT2Q10471 571 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 SIRPB2Q5JXA9 342 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CAPN13Q6MZZ7 669 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PAQR3Q6TCH7 311 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 LPCAT2Q7L5N7 544 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 BNIPLQ7Z465 357 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 DSELQ8IZU8 1212 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 USP7Q93009 1102 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 GPR62Q9BZJ7 368 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 SNTNA6NMZ2 147 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 MAN1A2O60476 641 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CHRNA1P02708 482 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ELP6Q0PNE2 266 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 KLF1Q13351 362 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 IGDCC3Q8IVU1 814 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ZNF296Q8WUU4 475 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CLIP3Q96DZ5 547 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CDKN2AIPNLQ96HQ2 116 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 C11orf84Q9BUA3 381 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 LRTM1Q9HBL6 345 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PHPT1Q9NRX4 125 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ABHD14A-ACY1A0A1B0GW23 586 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ILVBLA1L0T0 632 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 KRT87PA6NCN2 255 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CAPN1P07384 714 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 GALTP07902 379 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms