RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 RPL36Q9Y3U8 105 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LRP5LA4QPB2 252 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TNFRSF10BO14763 440 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ERCC1P07992 297 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GMCL1P1Q8NEA9 526 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CENPIQ92674 756 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF570Q96NI8 536 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 BEX2Q9BXY8 128 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 OPA3Q9H6K4 179 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 IFT46Q9NQC8 304 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GON4LQ3T8J9 2241 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 E5RI56 91 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 M0R233 179 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 VEGFAP15692 232 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RPS12P25398 132 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CA5AP35218 305 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SMCO1Q147U7 214 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 COX19Q49B96 90 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZBTB33Q86T24 672 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DNAJC22Q8N4W6 341 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PIGKQ92643 395 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TIFAQ96CG3 184 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 KCNMB3Q9NPA1 279 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ACOT13Q9NPJ3 140 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ERVK-11Q9UQG0 969 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RGS10O43665 173 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DNAJB13P59910 316 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CES3Q6UWW8 571 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 METTL8Q9H825 291 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ANKRD61A6NGH8 418 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 BCAS2O75934 225 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 HDCP19113 662 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 EIPR1Q53HC9 387 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PRAMEF18Q5VWM3 479 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 OTOAQ7RTW8 1153 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CCDC115Q96NT0 180 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 HDHD5Q9BXW7 423 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MVB12BQ9H7P6 319 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM184CQ9NVA4 438 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 B2RBV5 119 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CASKO14936 926 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RETP07949 1114 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CSF2RAP15509 400 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A6P19224 532 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CDK10Q15131 360 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 C21orf62-AS1Q17RA5 79 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LCN1P1Q5VSP4 162 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 C1orf94Q6P1W5 598 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RFWD3Q6PCD5 774 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ADGRE3Q9BY15 652 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZIM2Q9NZV7 527 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GULP1Q9UBP9 304 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UGDHO60701 494 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SDHBP21912 280 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MRPS5P82675 430 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM40Q6P9F5 258 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MYCT1Q8N699 235 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 OR52E4Q8NGH9 312 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 OR5W2Q8NH69 310 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PPP1R14AQ96A00 147 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FAIMQ9NVQ4 179 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PCDHA1Q9Y5I3 950 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DHRS12A0PJE2 317 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 NDST3O95803 873 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DLGAP3O95886 979 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MOCS2O96007 188 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 NELFEP18615 380 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FGL2Q14314 439 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CLCA4Q14CN2 919 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF773Q6PK81 442 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PLEKHG7Q6ZR37 379 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 COL21A1Q96P44 957 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GPATCH1Q9BRR8 931 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 VCX2Q9H322 139 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CNOT2Q9NZN8 540 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PI4KBQ9UBF8 816 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FEM1BQ9UK73 627 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PCDHGA2Q9Y5H1 932 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 AGLP35573 1532 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RFC3P40938 356 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DMC1Q14565 340 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ARID3BQ8IVW6 561 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DEPTORQ8TB45 409 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TEX47Q8TBZ9 253 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MEPEQ9NQ76 525 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CST8O60676 142 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ACSL1P33121 698 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SH3D19Q5HYK7 790 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DNAAF1Q8NEP3 725 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ADAMTS16Q8TE57 1224 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SMG7Q92540 1137 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF416Q9BWM5 594 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 BCLAF3A2AJT9 711 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 P2RX6O15547 441 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CRTAMO95727 393 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ANXA3P12429 323 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CD1EP15812 388 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GSSP48637 474 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 STYK1Q6J9G0 422 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms