RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ANKRD12Q6UB98 2062 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 SMIM31A0A1B0GVY4 71 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 LCHNA4D1U4 455 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 CNPP09543 421 aaKnown RBP22.46■■□□□ 1.19
LDB1-201ENST00000361198 ACRP10323 421 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 RBBP5Q15291 538 aaKnown RBP22.46■■□□□ 1.19
LDB1-201ENST00000361198 ZRANB3Q5FWF4 1079 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 FAM217AQ8IXS0 508 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 DCAF4L2Q8NA75 395 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 OR6K2Q8NGY2 324 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 EID2BQ96D98 161 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 YME1L1Q96TA2 773 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 NPAS2Q99743 824 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 DERL2Q9GZP9 239 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 PLK2Q9NYY3 685 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 NDUFA13Q9P0J0 144 aa22.46■■□□□ 1.19
LDB1-201ENST00000361198 GPR39O43194 453 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 CKMP06732 381 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 SMIM18P0DKX4 95 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 HS6ST3Q8IZP7 471 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 RNF148Q8N7C7 305 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 HMGCLL1Q8TB92 370 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 DDI1Q8WTU0 396 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 COPS7BQ9H9Q2 264 aaPredicted RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 OAS3Q9Y6K5 1087 aaKnown RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 COMMD3-BMI1R4GMX3 469 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 PDE4DIPQ5VU43 2346 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 DENND4CQ5VZ89 1909 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 H7C0S8 307 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 TRIM38O00635 465 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 NRG2O14511 850 aaPredicted RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 SMAD6O43541 496 aaKnown RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 NIPSNAP2O75323 286 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 BMP1P13497 986 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 GFAPP14136 432 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 PKMP14618 531 aaKnown RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 TTPAP49638 278 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 CTSL3PQ5NE16 218 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 CAMK1DQ8IU85 385 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 STAG3L4Q8TBR4 150 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 KLHL32Q96NJ5 620 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 NSUN5Q96P11 429 aaKnown RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 MRPL1Q9BYD6 325 aaKnown RBP22.45■■□□□ 1.18
LDB1-201ENST00000361198 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.45■■□□□ 1.18
LDB1-201ENST00000361198 UBAP1Q9NZ09 502 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 CLEC4EQ9ULY5 219 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 PCDHGA7Q9Y5G6 932 aa22.45■■□□□ 1.18
LDB1-201ENST00000361198 ATP6AP2A0A1C7CYW4 349 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 KERAO60938 352 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 ATP6AP2O75787 350 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 CDK14O94921 469 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 ALPIP09923 528 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 CTPS1P17812 591 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 RAD51Q06609 339 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 PTK2BQ14289 1009 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 TSNQ15631 228 aaKnown RBP22.44■■□□□ 1.18
LDB1-201ENST00000361198 UGT3A2Q3SY77 523 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 GK5Q6ZS86 529 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 ASB9Q96DX5 294 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 PKP2Q99959 881 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 HACD3Q9P035 362 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 IL17CQ9P0M4 197 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 SARDHQ9UL12 918 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 RNF112Q9ULX5 631 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 VPS9D1Q9Y2B5 631 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 DOCK6Q96HP0 2047 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 KIAA1671Q9BY89 1806 aa22.44■■□□□ 1.18
LDB1-201ENST00000361198 TRIM43BA6NCK2 446 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 CDC7O00311 574 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 UBDO15205 165 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 STX5Q13190 355 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 LRRC26Q2I0M4 334 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 RAB44Q7Z6P3 723 aaPredicted RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 BBS7Q8IWZ6 715 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 TMEM102Q8N9M5 508 aaPredicted RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 MRPS31Q92665 395 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 TRIM43Q96BQ3 446 aaPredicted RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 MRPL40Q9NQ50 206 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 SUCOQ9UBS9 1254 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 LSM7Q9UK45 103 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 MAFFQ9ULX9 164 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 ZNF711Q9Y462 761 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 AP4B1Q9Y6B7 739 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 SUPT3HB4E1H0 165 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 SUPT3HO75486 399 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 FGF18O76093 207 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 GJA1P17302 382 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 FBXO48Q5FWF7 155 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 TMC8Q8IU68 726 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 CLYBLQ8N0X4 340 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 SIDT2Q8NBJ9 832 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 NAT14Q8WUY8 206 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 C3orf30Q96M34 536 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 C2orf49Q9BVC5 232 aaPredicted RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 LRRC3Q9BY71 257 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 ZBP1Q9H171 429 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 MID1IP1Q9NPA3 183 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 CFAP97Q9P2B7 532 aa22.43■■□□□ 1.18
LDB1-201ENST00000361198 CNOT11Q9UKZ1 510 aaKnown RBP22.43■■□□□ 1.18
LDB1-201ENST00000361198 DNAJC15Q9Y5T4 150 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms