RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 OCMP0CE72 109 aaPredicted RBP16.24■□□□□ 0.19
SCAF1-201ENST00000360565 PROZP22891 400 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ITPKAP23677 461 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 KRT20P35900 424 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 OR7A2PQ8NGA2 310 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 REPS1Q96D71 796 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 LRTM1Q9HBL6 345 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 ASAH2Q9NR71 780 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 MOCS1Q9NZB8 636 aa16.24■□□□□ 0.19
SCAF1-201ENST00000360565 RNASEH1O60930 286 aaKnown RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 UGT2B4P06133 528 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 IMPDH1P20839 514 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 GDF6Q6KF10 455 aaPredicted RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF614Q8N883 585 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 SIDT2Q8NBJ9 832 aaKnown RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 NAT14Q8WUY8 206 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 FCRL3Q96P31 734 aaPredicted RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 SELENONQ9NZV5 590 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 RPS6KA6Q9UK32 745 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 TSC22D4Q9Y3Q8 395 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 A0A0U1RQF3 1178 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 MATN2O00339 956 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 PGGT1BP53609 377 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 LYPLAL1Q5VWZ2 237 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 MSANTD2Q6P1R3 559 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 PRSS55Q6UWB4 352 aaPredicted RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 PIM3Q86V86 326 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 OR9I1Q8NGQ6 314 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 OSBPL6Q9BZF3 934 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 SELPP16109 830 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 OGNP20774 298 aaKnown RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 GRB14Q14449 540 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 TP53INP2Q8IXH6 220 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 OFCC1Q8IZS5 231 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 ROPN1LQ96C74 230 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 MOCOSQ96EN8 888 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 CENPNQ96H22 339 aaPredicted RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 REXO5Q96IC2 774 aaKnown RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 PLEKHG4BQ96PX9 1271 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 LOC100506127A0A0U1RQW1 187 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 IQCF5A8MTL0 148 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 KPNA5O15131 536 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 SLC22A2O15244 555 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 DGUOKQ16854 277 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 PAGE2BQ5JRK9 111 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 DPY19L2P1Q6NXN4 242 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF605Q86T29 641 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 SUSD3Q96L08 255 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 CFAP97Q9P2B7 532 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 FCF1Q9Y324 198 aaKnown RBP16.23■□□□□ 0.19
SCAF1-201ENST00000360565 KCTD3Q9Y597 815 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 KCNE2Q9Y6J6 123 aa16.23■□□□□ 0.19
SCAF1-201ENST00000360565 DYTNA2CJ06 578 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 STK25O00506 426 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 DNAJA2O60884 412 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 RASAL3Q86YV0 1011 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 ITCHQ96J02 903 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 FEM1CQ96JP0 617 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 SMAD5Q99717 465 aaKnown RBP16.22■□□□□ 0.19
SCAF1-201ENST00000360565 MIPEPQ99797 713 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 GORASP1Q9BQQ3 440 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 HMG20AQ9NP66 347 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 CYP4B1P13584 511 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 ACVRL1P37023 503 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 CACNG1Q06432 222 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 DLG1Q12959 904 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 C1DQ13901 141 aaKnown RBP16.22■□□□□ 0.19
SCAF1-201ENST00000360565 TRIM48Q8IWZ4 208 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 OR8H2Q8N162 312 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 PARP8Q8N3A8 854 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 KIFC1Q9BW19 673 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 TNKS2Q9H2K2 1166 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 BRD9Q9H8M2 597 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 SMPD3Q9NY59 655 aaPredicted RBP16.22■□□□□ 0.19
SCAF1-201ENST00000360565 E7ENX8 843 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 G3V2T6 193 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 NIPSNAP2O75323 286 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 TRMUO75648 421 aaKnown RBP16.22■□□□□ 0.19
SCAF1-201ENST00000360565 CCNA2P20248 432 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 HERVK_113P63132 956 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 SIRPB2Q5JXA9 342 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 CCDC149Q6ZUS6 474 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF540Q8NDQ6 660 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 CANT1Q8WVQ1 401 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 ERVK-6Q9BXR3 956 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 ATG10Q9H0Y0 220 aa16.22■□□□□ 0.19
SCAF1-201ENST00000360565 SNTNA6NMZ2 147 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 EOMESO95936 686 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 GPIP06744 558 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 RPS9P46781 194 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 NCF4Q15080 339 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CYP2A13Q16696 494 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 INTS11Q5TA45 600 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms