RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PHBP35232 272 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 THOC5Q13769 683 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 SEMA3AQ14563 771 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 STAT4Q14765 748 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 MRNIPQ6NTE8 343 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 CERS6Q6ZMG9 384 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 NXPE1Q8N323 547 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 MREGQ8N565 214 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 GLYATL1Q969I3 302 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 COX14Q96I36 57 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 TCF12Q99081 682 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 MYOCQ99972 504 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 APOOQ9BUR5 198 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 SMYD2Q9NRG4 433 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 CA5BQ9Y2D0 317 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 SLCO1B1Q9Y6L6 691 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 SDK1Q7Z5N4 2213 aa12.3□□□□□ -0.44
NIF3L1-201ENST00000359683 A0A1W2PR77 199 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 OGNP20774 298 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 STX2P32856 288 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 YPEL5P62699 121 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 RACK1P63244 317 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 CDK3Q00526 305 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 FOXK2Q01167 660 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 SLC29A2Q14542 456 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 UAP1Q16222 522 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TYSND1Q2T9J0 566 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 LYPLAL1Q5VWZ2 237 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 LYSMD4Q5XG99 296 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 KYAT3Q6YP21 454 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 SERPINA9Q86WD7 417 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 HEATR4Q86WZ0 1026 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 CILP2Q8IUL8 1156 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 DDHD1Q8NEL9 900 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 SLC6A18Q96N87 628 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 FAM167BQ9BTA0 163 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 LGR4Q9BXB1 951 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 WDR26Q9H7D7 661 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 IARS2Q9NSE4 1012 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 CRLS1Q9UJA2 301 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 FBXO5Q9UKT4 447 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 IGLV3-16A0A075B6K0 115 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 A0A087WUV0 522 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 A6NNZ2 444 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 CXorf49A8MYA2 514 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 H0Y8X5 98 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 INPP4BO15327 924 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 SLC25A14O95258 325 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 S1PR4O95977 384 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 H2AFXP16104 143 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 ITPKAP23677 461 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 ACRV1P26436 265 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 HSD17B3P37058 310 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TTPAP49638 278 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 SMAD1Q15797 465 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 DBN1Q16643 649 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 KBTBD12Q3ZCT8 623 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 AARS2Q5JTZ9 985 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 LDLRAP1Q5SW96 308 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 BEND6Q5SZJ8 279 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 GPRC6AQ5T6X5 926 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 Q6ZSR6 202 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 KIAA0408Q6ZU52 694 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 LDB1Q86U70 411 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 IQCHQ86VS3 1027 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 DENND6AQ8IWF6 608 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 PNPLA1Q8N8W4 532 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 MFSD2AQ8NA29 543 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 C2CD4AQ8NCU7 369 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 GABPB2Q8TAK5 448 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TTC1Q99614 292 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 MIR1-1HGQ9H1L0 117 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 ACSS3Q9H6R3 686 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TRIM39Q9HCM9 518 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 TM9SF3Q9HD45 589 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 PPANQ9NQ55 473 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 PHPT1Q9NRX4 125 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 GPR27Q9NS67 375 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 ZDHHC3Q9NYG2 299 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 OR1A2Q9Y585 309 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 PLXNB3Q9ULL4 1909 aa12.29□□□□□ -0.44
NIF3L1-201ENST00000359683 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 BCAT2O15382 392 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 WNT1P04628 370 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms