RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 GPR33Q49SQ1 333 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 PPM1JQ5JR12 505 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 N4BP2L1Q5TBK1 243 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF852Q6ZMS4 543 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 CDHR3Q6ZTQ4 885 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 CLEC14AQ86T13 490 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 DTWD2Q8NBA8 298 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 ACVR1CQ8NER5 493 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 FLCNQ8NFG4 579 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 SHDQ96IW2 340 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 AARSD1Q9BTE6 412 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 EPN3Q9H201 632 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 ASB8Q9H765 288 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 FBRSQ9HAH7 460 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 ZDHHC4Q9NPG8 344 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 IL26Q9NPH9 171 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 NFKBIL1Q9UBC1 381 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 SARDHQ9UL12 918 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 ACOT9Q9Y305 439 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 COMMD10Q9Y6G5 202 aa13.76□□□□□ -0.21
PDLIM5-203ENST00000359265 TRBV5-4A0A0C4DH59 114 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 RGSL1A5PLK6 1076 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 GMNCA6NCL1 334 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 SYNCRIPO60506 623 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 EGFP01133 1207 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 APOA4P06727 396 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ELFN1P0C7U0 828 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ADRB3P13945 408 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 FDXRP22570 491 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 NTSR1P30989 418 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 WASP42768 502 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 PTGER3P43115 390 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 SERPINB4P48594 390 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 PTSQ03393 145 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 NFATC2Q13469 925 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ITGA9Q13797 1035 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 STARD3Q14849 445 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 CHRNA6Q15825 494 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 DBN1Q16643 649 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 PDK4Q16654 411 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 CCDC153Q494R4 210 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 TBC1D1Q86TI0 1168 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 MMAAQ8IVH4 418 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 CEP97Q8IW35 865 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 TRIM42Q8IWZ5 723 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 PIANPQ8IYJ0 282 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 CCDC63Q8NA47 563 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 GPR26Q8NDV2 337 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ARMC2Q8NEN0 867 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 EZH1Q92800 747 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ULK4Q96C45 1275 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 CHMP6Q96FZ7 201 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 OLFM1Q99784 485 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 NSRP1Q9H0G5 558 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 CDH19Q9H159 772 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 RSPH9Q9H1X1 276 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 C12orf65Q9H3J6 166 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 POPDC3Q9HBV1 291 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ARHGEF3Q9NR81 526 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 FBXL21Q9UKT6 434 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 VWA7Q9Y334 891 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 PCDHB1Q9Y5F3 818 aa13.75□□□□□ -0.21
PDLIM5-203ENST00000359265 F5P12259 2224 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 DCDC2BA2VCK2 349 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 PLIN3O60664 434 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 RHOBTB1O94844 696 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 TOP3BO95985 862 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ADH1BP00325 375 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ESR1P03372 595 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 PROCP04070 461 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 PYGLP06737 847 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 NEFHP12036 1026 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 PKMP14618 531 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF7P17097 686 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 AOC1P19801 751 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 CDKN1CP49918 316 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ADARP55265 1226 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 IRF9Q00978 393 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ITIH4Q14624 930 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 CST6Q15828 149 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF776Q68DI1 518 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF549Q6P9A3 640 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 LIPIQ6XZB0 460 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 RGS9BPQ6ZS82 235 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ERN2Q76MJ5 926 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 HSD11B1LQ7Z5J1 315 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 SERPINA9Q86WD7 417 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 RBFAQ8N0V3 343 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF398Q8TD17 642 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 LRRC8CQ8TDW0 803 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms