RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RAB10P61026 200 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 IRF9Q00978 393 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 CREB5Q02930 508 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 KYAT3Q6YP21 454 aaKnown RBP18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 NRSN1Q8IZ57 195 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 MRGPRX1Q96LB2 322 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 FAM111AQ96PZ2 611 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 BOCQ9BWV1 1114 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 SPATA16Q9BXB7 569 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 P2RY12Q9H244 342 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 VPS11Q9H270 941 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 FBXL12Q9NXK8 326 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 CRLS1Q9UJA2 301 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 VPS9D1Q9Y2B5 631 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 MED16Q9Y2X0 877 aa18.01■□□□□ 0.47
SMARCD3-202ENST00000356800 RECQL5O94762 991 aaPredicted RBP18■□□□□ 0.47
SMARCD3-202ENST00000356800 GSTA1P08263 222 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 STMN1P16949 149 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 PTGER3P43115 390 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 CRY1Q16526 586 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 PDK4Q16654 411 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 CTSL3PQ5NE16 218 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 RGS9BPQ6ZS82 235 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 CYP2U1Q7Z449 544 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 CLEC14AQ86T13 490 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 LCA5Q86VQ0 697 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 RAVER1Q8IY67 606 aaKnown RBP18■□□□□ 0.47
SMARCD3-202ENST00000356800 PLD6Q8N2A8 252 aaKnown RBP18■□□□□ 0.47
SMARCD3-202ENST00000356800 PELI3Q8N2H9 469 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 DTX3LQ8TDB6 740 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 PAIP2Q9BPZ3 127 aaKnown RBP18■□□□□ 0.47
SMARCD3-202ENST00000356800 CDH19Q9H159 772 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 LMAN1LQ9HAT1 526 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 RAD18Q9NS91 495 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18■□□□□ 0.47
SMARCD3-202ENST00000356800 FBXL21Q9UKT6 434 aa18■□□□□ 0.47
SMARCD3-202ENST00000356800 FADS2P1A8MWK0 482 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 WISP3O95389 354 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 FAM107AO95990 144 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 DNTTP04053 509 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 NDUFV2P19404 249 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 FDXRP22570 491 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 CRABP2P29373 138 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 ADARP55265 1226 aaKnown RBP17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 ITGA9Q13797 1035 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 LYPLAL1Q5VWZ2 237 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 FAM45BPQ6NSW5 357 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 PIM3Q86V86 326 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 TRAM1L1Q8N609 369 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 FAM45AQ8TCE6 357 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 CXorf40AQ8TE69 158 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 NAT14Q8WUY8 206 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 SIPA1Q96FS4 1042 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 C1QTNF1Q9BXJ1 281 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 FOXQ1Q9C009 403 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 LTB4R2Q9NPC1 389 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 ZNF358Q9NW07 568 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 C2orf42Q9NWW7 574 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 EMCNQ9ULC0 261 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 ANKRD6Q9Y2G4 727 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 PFDN6O15212 129 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 TSPAN6O43657 245 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 DNAJC6O75061 913 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 GAS6Q14393 721 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 SETMARQ53H47 684 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 RAPH1Q70E73 1250 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 CENPLQ8N0S6 344 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 SIX5Q8N196 739 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 GANCQ8TET4 914 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 AP2M1Q96CW1 435 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 CCT8L2Q96SF2 557 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 SMOXQ9NWM0 555 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 TLK1Q9UKI8 766 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 PRSS21Q9Y6M0 314 aa17.99■□□□□ 0.47
SMARCD3-202ENST00000356800 IGLV3-16A0A075B6K0 115 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 TCRBV21S2A2A0A5A6 115 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 KANSL1LA0AUZ9 987 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 CHURC1-FNTBB4DL54 471 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 PRMT5O14744 637 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 SOD1P00441 154 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 COL6A2P12110 1019 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 PKMP14618 531 aaKnown RBP17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 GABRG2P18507 467 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 SLC12A2P55011 1212 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 B4GALNT1Q00973 533 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 ZBTB16Q05516 673 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 DLG1Q12959 904 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 UBXN2BQ14CS0 331 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 TAF1BQ53T94 588 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 GPRC6AQ5T6X5 926 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 TMEM207Q6UWW9 146 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 ZNF765Q7L2R6 523 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 RBFAQ8N0V3 343 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 SYNPOQ8N3V7 929 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 FLCNQ8NFG4 579 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 ULK4Q96C45 1275 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 NUS1Q96E22 293 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 TSPAN17Q96FV3 270 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms