RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GPR85P60893 370 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 GALEQ14376 348 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 TPSAB1Q15661 275 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 C6orf132Q5T0Z8 1188 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 PIK3R6Q5UE93 754 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 CES5AQ6NT32 575 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 TCTE3Q8IZS6 198 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 FNDC5Q8NAU1 212 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 OR10T2Q8NGX3 314 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 SETD6Q8TBK2 473 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 RDH12Q96NR8 316 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 DPP3Q9NY33 737 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 WRAP73Q9P2S5 460 aaPredicted RBP15.65■□□□□ 0.1
RTN3-205ENST00000356000 ADAM28Q9UKQ2 775 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 HES2Q9Y543 173 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 COL4A1P02462 1669 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 WDR27A2RRH5 827 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 CLDN24A6NM45 220 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 INPP4BO15327 924 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 TBC1D4O60343 1298 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 DDCP20711 480 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 CD6P30203 668 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 GP5P40197 560 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 ETV6P41212 452 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 SLC15A1P46059 708 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 GZMKP49863 264 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 GTF2BQ00403 316 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 NFE2L1Q14494 772 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 NIPA1Q7RTP0 329 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 EFL1Q7Z2Z2 1120 aaKnown RBP15.64■□□□□ 0.1
RTN3-205ENST00000356000 HDDC2Q7Z4H3 204 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 ZMIZ2Q8NF64 920 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 NSUN6Q8TEA1 469 aaKnown RBP15.64■□□□□ 0.1
RTN3-205ENST00000356000 SDHCQ99643 169 aaPredicted RBP15.64■□□□□ 0.1
RTN3-205ENST00000356000 APOL4Q9BPW4 351 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 HOPXQ9BPY8 73 aaPredicted RBP15.64■□□□□ 0.1
RTN3-205ENST00000356000 FEM1AQ9BSK4 669 aa15.64■□□□□ 0.1
RTN3-205ENST00000356000 NUFIP1Q9UHK0 495 aaKnown RBP15.64■□□□□ 0.1
RTN3-205ENST00000356000 H0YC42 278 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 I3L521 148 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 FSHRP23945 695 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ATICP31939 592 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 CDH5P33151 784 aaPredicted RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 NPY2RP49146 381 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 NAGLUP54802 743 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ARPP19P56211 112 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 BAMBIQ13145 260 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 PRPSAP1Q14558 356 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 CLCA4Q14CN2 919 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ZBTB41Q5SVQ8 909 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 RBM20Q5T481 1227 aaKnown RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 PRMT9Q6P2P2 845 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 TXNDC11Q6PKC3 985 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 TMEM270Q6UE05 265 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 KIAA1324Q6UXG2 1013 aaKnown RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 CDH24Q86UP0 819 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 CYP2W1Q8TAV3 490 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 RDH11Q8TC12 318 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 SPPL2BQ8TCT7 592 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 TRPM4Q8TD43 1214 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ZNF566Q969W8 418 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 SECISBP2Q96T21 854 aaKnown RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 CPNE7Q9UBL6 633 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 KCNH4Q9UQ05 1017 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 PCDHA1Q9Y5I3 950 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 OR6C70A6NIJ9 312 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 UBDO15205 165 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ZNF623O75123 536 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 UGT2B17O75795 530 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 MPOP05164 745 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 MYL3P08590 195 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 HOXD4P09016 255 aaPredicted RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 IL1R1P14778 569 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 MAGEA11P43364 429 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 UGT2B15P54855 530 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 IRF9Q00978 393 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ZNF267Q14586 743 aaPredicted RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 PYCR3Q53H96 274 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 DENND5AQ6IQ26 1287 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 RBM23Q86U06 439 aaKnown RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.64■□□□□ 0.09
RTN3-205ENST00000356000 TMCO6Q96DC7 493 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 C1orf74Q96LT6 269 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 OR2A14Q96R47 310 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 TRAF4Q9BUZ4 470 aaPredicted RBP15.64■□□□□ 0.09
RTN3-205ENST00000356000 NIPAL2Q9H841 368 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 PCDHGB2Q9Y5G2 931 aa15.64■□□□□ 0.09
RTN3-205ENST00000356000 ZFC3H1O60293 1989 aaKnown RBP15.63■□□□□ 0.09
RTN3-205ENST00000356000 FOCADQ5VW36 1801 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 A0A096LPK6 155 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 TMEM233B4DJY2 109 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 LOC110117498-PIK3R3F6TDL0 507 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 UPK1AO00322 258 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 HPRP00739 348 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 APOA4P06727 396 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 MAP2K4P45985 399 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 ISL1P61371 349 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 HTRA3P83110 453 aa15.63■□□□□ 0.09
RTN3-205ENST00000356000 UBE3AQ05086 875 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms