RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SIRPB2Q5JXA9 342 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 ADGRG6Q86SQ4 1221 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 GALNT13Q8IUC8 556 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 RCOR2Q8IZ40 523 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 FBXO39Q8N4B4 442 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 SLC25A41Q8N5S1 370 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 OR6C4Q8NGE1 309 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 KCNE4Q8WWG9 221 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 P3H4Q92791 437 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 DESI2Q9BSY9 194 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 ADGRE3Q9BY15 652 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 THSD1Q9NS62 852 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 FOXJ2Q9P0K8 574 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 SCHIP1Q9P0W5 487 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 VPS18Q9P253 973 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 PISDQ9UG56 409 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 PACSIN2Q9UNF0 486 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 LOXL2Q9Y4K0 774 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 PCDHA3Q9Y5H8 950 aa16.56■□□□□ 0.24
PDLIM7-201ENST00000355572 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 PRAMEF33A0A0G2JMD5 474 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 IGHV5-10-1A0A0J9YXX1 117 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 GAPDHSO14556 408 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 PJA2O43164 708 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 KLK10O43240 276 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 EFSO43281 561 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 NUAK1O60285 661 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 PYGMP11217 842 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 CCL4P13236 92 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 RBMS1P29558 406 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 SLC5A2P31639 672 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 DCDC1P59894 354 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 CXADRP78310 365 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 OTUD4Q01804 1114 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 PLA2G4EQ3MJ16 856 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 ODF2Q5BJF6 829 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 PID1Q7Z2X4 250 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 ZNF547Q8IVP9 402 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 RAVER1Q8IY67 606 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 SFRP1Q8N474 314 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 ACTL9Q8TC94 416 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 CCHCR1Q8TD31 782 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 NAT14Q8WUY8 206 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 HTR3CQ8WXA8 447 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 GRAMD1AQ96CP6 724 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 FCRL5Q96RD9 977 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 GPR63Q9BZJ6 419 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 OR2AG1Q9H205 316 aa16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 KLHL8Q9P2G9 620 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 NFKBIL1Q9UBC1 381 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 SMG1Q96Q15 3661 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-201ENST00000355572 MGAQ8IWI9 3026 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 PRR19A6NJB7 356 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 RHPN2P1A8MT19 583 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 AGTP01019 485 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 PYGLP06737 847 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 ITGA2BP08514 1039 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 CTNNA2P26232 953 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 VAV2P52735 878 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 CRTC3Q6UUV7 619 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 TMTC1Q8IUR5 882 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 TRAM1L1Q8N609 369 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 IPMKQ8NFU5 416 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 GLYATL1Q969I3 302 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 CCDC97Q96F63 343 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 RBM41Q96IZ5 413 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 TMEM74Q96NL1 305 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 PRDM8Q9NQV8 689 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 HAUS2Q9NVX0 235 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 FAM153AQ9UHL3 310 aa16.54■□□□□ 0.24
PDLIM7-201ENST00000355572 RGSL1A5PLK6 1076 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 BTNL10A8MVZ5 291 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 C9orf172C9J069 976 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 APOC4-APOC2K7ER74 178 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 CHUKO15111 745 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 GRID2O43424 1007 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 PRAMEF10O60809 474 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 C1QL1O75973 258 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 CPNE6O95741 557 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 APOC2P02655 101 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 COL9A2Q14055 689 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 SLC1A5Q15758 541 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 ATP13A5Q4VNC0 1218 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 ZNF569Q5MCW4 686 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 ARHGAP40Q5TG30 622 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 C11orf96Q7Z7L8 435 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 APOL2Q9BQE5 337 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 CARD9Q9H257 536 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 IL26Q9NPH9 171 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 KCTD3Q9Y597 815 aa16.53■□□□□ 0.24
PDLIM7-201ENST00000355572 TCRBV7S2A1N4TA0A589 114 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 H7C0C1 242 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 DDX3YO15523 660 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 UGT1A9O60656 530 aa16.52■□□□□ 0.24
PDLIM7-201ENST00000355572 SNX2O60749 519 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms