RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GNPDA1P46926 289 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ADARP55265 1226 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TPSAB1Q15661 275 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TAF8Q7Z7C8 310 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 SLC9A6Q92581 669 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 EXOSC8Q96B26 276 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PLEKHG4BQ96PX9 1271 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ENPP3O14638 875 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 MATN4O95460 622 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PRNPP04156 253 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 UGT1A5P35504 534 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 FUT2Q10981 343 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 GALNT18Q6P9A2 607 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 SPATA19Q7Z5L4 167 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TCAIMQ8N3R3 496 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 AMER2Q8N7J2 671 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ATP6V1C2Q8NEY4 427 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 ZHX1-C8orf76Q96EF9 292 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 NOL11Q9H8H0 719 aaKnown RBP13.15□□□□□ -0.3
SCN8A-202ENST00000355133 SLC35C2Q9NQQ7 365 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 PRDM8Q9NQV8 689 aa13.15□□□□□ -0.3
SCN8A-202ENST00000355133 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 GNA12Q03113 381 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 C2orf80Q0P641 193 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 ZNF155Q12901 538 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 CXXC5Q7LFL8 322 aaKnown RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 GALNT5Q7Z7M9 940 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 IRGQQ8WZA9 623 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 FEM1CQ96JP0 617 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 C5orf34Q96MH7 638 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 PPM1MQ96MI6 270 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 TEFMQ96QE5 360 aaKnown RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 ZNF214Q9UL59 606 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 NRP2O60462 931 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SIN3BO75182 1162 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 CDH4P55283 916 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 STYXQ8WUJ0 223 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 FAM83DQ9H4H8 585 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 MRTO4Q9UKD2 239 aaKnown RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 MAP4K5Q9Y4K4 846 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 MAFBQ9Y5Q3 323 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 FPGTO14772 594 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SSNA1O43805 119 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 TIPRLO75663 272 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 C22orf31O95567 290 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 CRHR1P34998 444 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SPRYD7Q5W111 196 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 CPQQ9Y646 472 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 CCNCP24863 283 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 HSPA7P48741 367 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 POLR2JP52435 117 aaKnown RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 FOLH1Q04609 750 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 TWIST2Q8WVJ9 160 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SNX27Q96L92 541 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 IPPKQ9H8X2 491 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
SCN8A-202ENST00000355133 ARL8BQ9NVJ2 186 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 SEC14L3Q9UDX4 400 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 MAGEL2Q9UJ55 1249 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 COLEC10Q9Y6Z7 277 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 H7C0S8 307 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 STK16O75716 305 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 CLEC6AQ6EIG7 209 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 OR10H5Q8NGA6 315 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 PSMA8Q8TAA3 256 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 ACBD6Q9BR61 282 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 RTKNQ9BST9 563 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
SCN8A-202ENST00000355133 IFNGP01579 166 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 CYP3A5P20815 502 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 MAT2AP31153 395 aaKnown RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 NDUFA5Q16718 116 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
SCN8A-202ENST00000355133 SPPL2CQ8IUH8 684 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 NRSN1Q8IZ57 195 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 KBTBD8Q8NFY9 601 aa13.13□□□□□ -0.31
SCN8A-202ENST00000355133 ARNTL2Q8WYA1 636 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms