RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 C10orf53Q8N6V4 93 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 BPIFB6Q8NFQ5 453 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 OR4A15Q8NGL6 344 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 PRMT6Q96LA8 375 aaPredicted RBP7.99□□□□□ -1.13
HTT-201ENST00000355072 CCDC86Q9H6F5 360 aaKnown RBP7.99□□□□□ -1.13
HTT-201ENST00000355072 SNX15Q9NRS6 342 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 TRPV2Q9Y5S1 764 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 OTOFQ9HC10 1997 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 DPPA5A6NC42 116 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 IL1BP01584 269 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 CD6P30203 668 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 CDC25AP30304 524 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 RPL21P46778 160 aaKnown RBP7.99□□□□□ -1.13
HTT-201ENST00000355072 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 ZNF404Q494X3 552 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 ATXN7L2Q5T6C5 722 aaPredicted RBP7.99□□□□□ -1.13
HTT-201ENST00000355072 FAXCQ5TGI0 409 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 NCSTNQ92542 709 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 ISOC1Q96CN7 298 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 PNMA5Q96PV4 448 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 OR52B2Q96RD2 323 aa7.99□□□□□ -1.13
HTT-201ENST00000355072 RIOK2Q9BVS4 552 aaKnown RBP7.99□□□□□ -1.13
HTT-201ENST00000355072 RIMBP2O15034 1052 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ERCC1P07992 297 aaPredicted RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 ETFAP13804 333 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ENDOUP21128 410 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 GLRBP48167 497 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MILR1Q7Z6M3 343 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 GDPD1Q8N9F7 314 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 TERB2Q8NHR7 220 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 LHX5Q9H2C1 402 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 TMEM184CQ9NVA4 438 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 POFUT2Q9Y2G5 429 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 ANKRD31Q8N7Z5 1873 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 EFCAB9A8MZ26 197 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF487B1APH4 448 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 UROSP10746 265 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 FDPSP14324 419 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 MTHFRP42898 656 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 FTMTQ8N4E7 242 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 GANCQ8TET4 914 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MIOSQ9NXC5 875 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 FAM237BA0A1B0GVD1 139 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MAGEA12P43365 314 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MLLT6P55198 1093 aaPredicted RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 AGMOQ6ZNB7 445 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 OR4C6Q8NH72 309 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 AGAP3Q96P47 875 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 FAM50BQ9Y247 325 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 TECPR2O15040 1411 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 HMGN1P05114 100 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 HOXD8P13378 290 aaPredicted RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 POLR2JP52435 117 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 SEC23BQ15437 767 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 POMGNT2Q8NAT1 580 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 TCTEX1D2Q8WW35 142 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 TLCD1Q96CP7 247 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 C8orf48Q96LL4 319 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 HGH1Q9BTY7 390 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ITPAQ9BY32 194 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MRPL9Q9BYD2 267 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 ABCC13Q9NSE7 274 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 POLR3BQ9NW08 1133 aaPredicted RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 TBC1D24Q9ULP9 559 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ERVK-11Q9UQG0 969 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 PIKFYVEQ9Y2I7 2098 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 DUXAA6NLW8 204 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 SLC25A12O75746 678 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 GRK5P34947 590 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MATKP42679 507 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 CCNIQ14094 377 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 FBXO47Q5MNV8 452 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 PIK3R6Q5UE93 754 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF567Q8N184 647 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 AP2M1Q96CW1 435 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF597Q96LX8 424 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF696Q9H7X3 374 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ATP6V1G2-DDX39BF2Z307 99 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 H0Y858 1186 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 MT-ND2P03891 347 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 RLN1P04808 185 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 SVBPQ8N300 66 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF283Q8N7M2 679 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 WDSUB1Q8N9V3 476 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 COLGALT1Q8NBJ5 622 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF510Q9Y2H8 683 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 GSG1L2A8MUP6 293 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 M0QYT0 321 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 SLC33A1O00400 549 aaPredicted RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 ALFQ53S48 1182 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 BEND5Q7L4P6 421 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 HSFY1Q96LI6 401 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 PURBQ96QR8 312 aaKnown RBP7.98□□□□□ -1.13
HTT-201ENST00000355072 ZNF446Q9NWS9 450 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 LYVE1Q9Y5Y7 322 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 GMPRP36959 345 aa7.98□□□□□ -1.13
HTT-201ENST00000355072 AFF1P51825 1210 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms