RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TIMM22Q9Y584 194 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 BOLA2-SMG1P6H3BVE0 249 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 ARPC2O15144 300 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 B4GALT4O60513 344 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 CYP11A1P05108 521 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 DARSP14868 501 aaKnown RBP17.97■□□□□ 0.47
SMC4-201ENST00000344722 BCL2L1Q07817 233 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 CYP2A13Q16696 494 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 PABPC1LQ4VXU2 614 aaKnown RBP17.97■□□□□ 0.47
SMC4-201ENST00000344722 ZNF280DQ6N043 979 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 CYP2U1Q7Z449 544 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 LRRC3Q9BY71 257 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 DCSTAMPQ9H295 470 aa17.97■□□□□ 0.47
SMC4-201ENST00000344722 ZNF536O15090 1300 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 LRATO95237 230 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 BDNFP23560 247 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 PTPN9P43378 593 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 TCEAL1Q15170 157 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 MTSS1LQ765P7 747 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 ZFPM1Q8IX07 1006 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 NETO2Q8NC67 525 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 TUBA1CQ9BQE3 449 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 FAIMQ9NVQ4 179 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 ADAMDEC1O15204 470 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 HTRA2O43464 458 aaPredicted RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 ABCB7O75027 752 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 ZNF286BP0CG31 522 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 TPRG1LQ5T0D9 272 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 TMEM198Q66K66 360 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 HASPINQ8TF76 798 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 ASB8Q9H765 288 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 MCUBQ9NWR8 336 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 MAN2B2Q9Y2E5 1009 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 TCAF1Q9Y4C2 921 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 GABBR2O75899 941 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 PTX3P26022 381 aaPredicted RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 YWHAQP27348 245 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 FAUP35544 74 aaKnown RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 CPSF6Q16630 551 aaKnown RBP eCLIP17.96■□□□□ 0.474e-6■■■□□ 15.6
SMC4-201ENST00000344722 TIGD6Q17RP2 521 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 SMU1Q2TAY7 513 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 PRAMEF33A0A0G2JMD5 474 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 TCRBV7S3A2A0A539 114 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 PRAMEF10O60809 474 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 SERPINB7O75635 380 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 RECQL4O94761 1208 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 PGK1P00558 417 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 CATP04040 527 aaKnown RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 PCSK2P16519 638 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 FOXM1Q08050 763 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 MPP2Q14168 576 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 E2F2Q14209 437 aa17.96■□□□□ 0.47
SMC4-201ENST00000344722 C11orf24Q96F05 449 aaPredicted RBP17.96■□□□□ 0.47
SMC4-201ENST00000344722 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 EPORP19235 508 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 LPOP22079 712 aaPredicted RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 FAM180AQ6UWF9 173 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 TIFABQ6ZNK6 161 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 MPP5Q8N3R9 675 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 PHTF2Q8N3S3 785 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 OR4A15Q8NGL6 344 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 SENP8Q96LD8 212 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 ZNF607Q96SK3 696 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 ST3GAL5Q9UNP4 418 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 A0A0J9YVX5 310 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 NTSP30990 170 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 PRAMEF18Q5VWM3 479 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 ZDHHC21Q8IVQ6 265 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 GALNT12Q8IXK2 581 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 GPR65Q8IYL9 337 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 GFM1Q96RP9 751 aaKnown RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 DUSP16Q9BY84 665 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 DHRS7Q9Y394 339 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 CXorf49A8MYA2 514 aaPredicted RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 C9JVG2 144 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 KPNA5O15131 536 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 RPP40O75818 363 aaKnown RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 IGSF6O95976 241 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 UBA1P22314 1058 aaKnown RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 CYP4F8P98187 520 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 IKBKEQ14164 716 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 KCNJ11Q14654 390 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 MBLAC2Q68D91 279 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 ERMAPQ96PL5 475 aaPredicted RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 ZNHIT2Q9UHR6 403 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 ZNF490Q9ULM2 529 aaPredicted RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 IRAK3Q9Y616 596 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 MRPL42Q9Y6G3 142 aaKnown RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 FADS2P1A8MWK0 482 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 STX16-NPEPL1H3BU86 382 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 RPLP2P05387 115 aaKnown RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 ADRA1BP35368 520 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 KIR3DL1P43629 444 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 SPATS1Q496A3 300 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 SULT1C3Q6IMI6 304 aa17.95■□□□□ 0.46
SMC4-201ENST00000344722 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.95■□□□□ 0.46
SMC4-201ENST00000344722 ZNF517Q6ZMY9 492 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms