RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 CCDC68Q9H2F9 335 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 NCKIPSDQ9NZQ3 722 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 HAO1Q9UJM8 370 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 CAPN7Q9Y6W3 813 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 PLXNB3Q9ULL4 1909 aa13.47□□□□□ -0.25
CDC42-202ENST00000344548 MUC22E2RYF6 1773 aaPredicted RBP13.47□□□□□ -0.25
CDC42-202ENST00000344548 AGAP14A8MT82 685 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 UBFD1O14562 309 aaKnown RBP13.46□□□□□ -0.25
CDC42-202ENST00000344548 PRMT5O14744 637 aaPredicted RBP13.46□□□□□ -0.25
CDC42-202ENST00000344548 DCTN3O75935 186 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 IPO13O94829 963 aaKnown RBP13.46□□□□□ -0.25
CDC42-202ENST00000344548 SRPRAP08240 638 aaKnown RBP13.46□□□□□ -0.25
CDC42-202ENST00000344548 LAMP2P13473 410 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 CD1EP15812 388 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 ACRV1P26436 265 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 PRKAA2P54646 552 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 B4GALNT1Q00973 533 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 RUNX3Q13761 415 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 RCN2Q14257 317 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 ZNF234Q14588 700 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 GRIN2CQ14957 1233 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 SLC9B1Q4ZJI4 515 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 C9orf64Q5T6V5 341 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 Q6ZVL8 140 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 C10orf67Q8IYJ2 551 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 PBXIP1Q96AQ6 731 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 COG4Q9H9E3 785 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 POPDC3Q9HBV1 291 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 ARL8BQ9NVJ2 186 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 ZFP69BQ9UJL9 534 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 PLA2G4CQ9UP65 541 aa13.46□□□□□ -0.25
CDC42-202ENST00000344548 C16orf96A6NNT2 1141 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 TMEM114B3SHH9 223 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 FCHO1O14526 889 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 SPINT1O43278 529 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 FSBPO95073 299 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 RBP1P09455 135 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 SPINT3P49223 89 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 ADARP55265 1226 aaKnown RBP13.46□□□□□ -0.26
CDC42-202ENST00000344548 RALGDSQ12967 914 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 ATAT1Q5SQI0 421 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 GRAMD4Q6IC98 578 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 PARS2Q7L3T8 475 aaKnown RBP13.46□□□□□ -0.26
CDC42-202ENST00000344548 TREML1Q86YW5 311 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 CBARPQ8N350 705 aaPredicted RBP13.46□□□□□ -0.26
CDC42-202ENST00000344548 TERB1Q8NA31 727 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 PPP4R1Q8TF05 950 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.26
CDC42-202ENST00000344548 CDH19Q9H159 772 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 OBP2AQ9NY56 170 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 MID2Q9UJV3 735 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 APPL1Q9UKG1 709 aa13.46□□□□□ -0.26
CDC42-202ENST00000344548 A0A1B0GTL3 188 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 NPEPPSL1A6NEC2 478 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 GRID2O43424 1007 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 MTX2O75431 263 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 ALOX15P16050 662 aaPredicted RBP13.45□□□□□ -0.26
CDC42-202ENST00000344548 ETV3P41162 512 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 HK3P52790 923 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 CDH13P55290 713 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 KCNJ2P63252 427 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 UBAP2LQ14157 1087 aaKnown RBP13.45□□□□□ -0.26
CDC42-202ENST00000344548 SETDB1Q15047 1291 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 ZNF805Q5CZA5 627 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 AARS2Q5JTZ9 985 aaKnown RBP13.45□□□□□ -0.26
CDC42-202ENST00000344548 KLC3Q6P597 504 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 BRAT1Q6PJG6 821 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 NXPE1Q8N323 547 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 KIAA1958Q8N8K9 716 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 WFIKKN2Q8TEU8 576 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 KCNJ9Q92806 393 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 FAM129BQ96TA1 746 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 TMEM245Q9H330 911 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 WDR55Q9H6Y2 383 aaPredicted RBP13.45□□□□□ -0.26
CDC42-202ENST00000344548 CRLS1Q9UJA2 301 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 KIAA1549LQ6ZVL6 1849 aa13.45□□□□□ -0.26
CDC42-202ENST00000344548 TBC1D3BA6NDS4 549 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 KPNA3O00505 521 aaPredicted RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 VPS26AO75436 327 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 UNC5CO95185 931 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ESR1P03372 595 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ASLP04424 464 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 GM2AP17900 193 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ITGALP20701 1170 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 GDI1P31150 447 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 IL12RB1P42701 662 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 ALDH18A1P54886 795 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 DNAJB13P59910 316 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 PDGFRLQ15198 375 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 PFKFB4Q16877 469 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 KHDC1Q4VXA5 237 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
CDC42-202ENST00000344548 CERS6Q6ZMG9 384 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 PELI3Q8N2H9 469 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 KDM1BQ8NB78 822 aa13.44□□□□□ -0.26
CDC42-202ENST00000344548 PPP2R3CQ969Q6 453 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms