RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PBX2P40425 430 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 AP2B1P63010 937 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 SULT2A1Q06520 285 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 CBX2Q14781 532 aaPredicted RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 CUZD1Q86UP6 607 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 ZSWIM9Q86XI8 627 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 SIDT2Q8NBJ9 832 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 LEMD2Q8NC56 503 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 SLC30A3Q99726 388 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 TRMT6Q9UJA5 497 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 G3BP2Q9UN86 482 aaKnown RBP18.48■□□□□ 0.55
HOXA9-201ENST00000343483 WNT6Q9Y6F9 365 aa18.48■□□□□ 0.55
HOXA9-201ENST00000343483 REV3LO60673 3130 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 CAPN8A6NHC0 703 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 E5RI56 91 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 CCNT2O60583 730 aaKnown RBP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 TSPAN8P19075 237 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 CHRM3P20309 590 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 PTGER3P43115 390 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 HERVK_113P63132 956 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 NFKB2Q00653 900 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 ZRSR2Q15696 482 aaKnown RBP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 ZNF77Q15935 545 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 PFKFB4Q16877 469 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 MYLK3Q32MK0 819 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 PRSS36Q5K4E3 855 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 LY6G5CQ5SRR4 150 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 ZNF678Q5SXM1 525 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 DEFB107AQ8IZN7 70 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 PTGR2Q8N8N7 351 aaPredicted RBP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 PPFIBP2Q8ND30 876 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 RHEBL1Q8TAI7 183 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 LENG8Q96PV6 779 aaPredicted RBP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 RTKNQ9BST9 563 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 ERVK-6Q9BXR3 956 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 DERL2Q9GZP9 239 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 GSTO2Q9H4Y5 243 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 TFB2MQ9H5Q4 396 aaKnown RBP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 CXorf56Q9H5V9 222 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 SARS2Q9NP81 518 aaKnown RBP18.47■□□□□ 0.55
HOXA9-201ENST00000343483 RNF112Q9ULX5 631 aa18.47■□□□□ 0.55
HOXA9-201ENST00000343483 SKAP2O75563 359 aaPredicted RBP18.46■□□□□ 0.55
HOXA9-201ENST00000343483 PDE5AO76074 875 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 GFAPP14136 432 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 ANPEPP15144 967 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 PIK3R1P27986 724 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 SEMG2Q02383 582 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 L3HYPDHQ96EM0 354 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 ZDHHC6Q9H6R6 413 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 TNFRSF12AQ9NP84 129 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 TBC1D14Q9P2M4 693 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 SLCO3A1Q9UIG8 710 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 CDH22Q9UJ99 828 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 TRPC5OSA6NMA1 111 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 SUPT3HB4E1H0 165 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 SUPT3HO75486 399 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 ESR1P03372 595 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 CEBPBP17676 345 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 ECT2LQ008S8 904 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 TSNQ15631 228 aaKnown RBP18.46■□□□□ 0.55
HOXA9-201ENST00000343483 PGM2L1Q6PCE3 622 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 RAB44Q7Z6P3 723 aaPredicted RBP18.46■□□□□ 0.55
HOXA9-201ENST00000343483 STK40Q8N2I9 435 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 AFAP1L2Q8N4X5 818 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 STAG3L4Q8TBR4 150 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 KIAA1191Q96A73 305 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 ISG20Q96AZ6 181 aaKnown RBP18.46■□□□□ 0.55
HOXA9-201ENST00000343483 ATOH8Q96SQ7 321 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 IKZF3Q9UKT9 509 aa18.46■□□□□ 0.55
HOXA9-201ENST00000343483 HELZP42694 1942 aaKnown RBP18.45■□□□□ 0.54
HOXA9-201ENST00000343483 NPEPPSL1A6NEC2 478 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 NPIPB15A6NHN6 443 aaPredicted RBP18.45■□□□□ 0.54
HOXA9-201ENST00000343483 IQCF5A8MTL0 148 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 BTN3A1O00481 513 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 KERAO60938 352 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 SIX3O95343 332 aaPredicted RBP18.45■□□□□ 0.54
HOXA9-201ENST00000343483 CA3P07451 260 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 THRAP10827 490 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 MTHFD2P13995 350 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 CCNHP51946 323 aaPredicted RBP18.45■□□□□ 0.54
HOXA9-201ENST00000343483 ATP6V0D1P61421 351 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 BTKQ06187 659 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 TBL3Q12788 808 aaKnown RBP18.45■□□□□ 0.54
HOXA9-201ENST00000343483 ELMSAN1Q6PJG2 1045 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 DPY19L3Q6ZPD9 716 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 TSPAN33Q86UF1 283 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 NKAPQ8N5F7 415 aaKnown RBP18.45■□□□□ 0.54
HOXA9-201ENST00000343483 CD200R1Q8TD46 325 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 STON2Q8WXE9 905 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 MYLIPQ8WY64 445 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 KCNJ9Q92806 393 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 TRMOQ9BU70 441 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 CCDC28BQ9BUN5 200 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 ASB8Q9H765 288 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 IL26Q9NPH9 171 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 MYO7AQ13402 2215 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 MYO9BQ13459 2157 aa18.45■□□□□ 0.54
HOXA9-201ENST00000343483 CXorf51AA0A1B0GTR3 108 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms