RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 VAPBO95292 243 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 PIGNO95427 931 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 HK1P19367 917 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 CASRP41180 1078 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 TUFMP49411 452 aaKnown RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 SPOCD1Q6ZMY3 1216 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 C7orf50Q9BRJ6 194 aaKnown RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 KERAO60938 352 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 LATS1O95835 1130 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 ACVR2AP27037 513 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 CLCN5P51795 746 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 SNRNP200O75643 2136 aaKnown RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 SLC6A4P31645 630 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 PCDH1Q08174 1060 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 TOB2Q14106 344 aaPredicted RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ASTE1Q2TB18 679 aaPredicted RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 MALSU1Q96EH3 234 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 DENND2DQ9H6A0 471 aaPredicted RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ALG9Q9H6U8 611 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SDK1Q7Z5N4 2213 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ITGA2BP08514 1039 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 IFI30P13284 250 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 KELP23276 732 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 CBX2Q14781 532 aaPredicted RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 HSD17B12Q53GQ0 312 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 DET1Q7L5Y6 550 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SPATA19Q7Z5L4 167 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 PP2D1A8MPX8 630 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SLC34A2O95436 690 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 RAB5BP61020 215 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ZDHHC20Q5W0Z9 365 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 GPR156Q8NFN8 814 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 POF1BQ8WVV4 589 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 MXRA8Q9BRK3 442 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SLC5A7Q9GZV3 580 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ZBTB22O15209 634 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 POLR2HP52434 150 aaKnown RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SELENOVP59797 346 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 CYB5R4Q7L1T6 521 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 FABP12A6NFH5 140 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 CSTBP04080 98 aaKnown RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 E2F1Q01094 437 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 PUM1Q14671 1186 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 GNMTQ14749 295 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 OXER1Q8TDS5 423 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 PLEKHA6Q9Y2H5 1048 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 EML1O00423 815 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 PEX14O75381 377 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 VNN2O95498 520 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 HRGP04196 525 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 CARD16Q5EG05 197 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 B3GAT2Q9NPZ5 323 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 NMT2O60551 498 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ATP5A1P25705 553 aaKnown RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 CALML5Q9NZT1 146 aa17.54■□□□□ 0.4
SMAD4-201ENST00000342988 RPL26L1Q9UNX3 145 aaKnown RBP17.54■□□□□ 0.4
SMAD4-201ENST00000342988 SRRM3A6NNA2 597 aaPredicted RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 H0Y858 1186 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 SLC9A3P48764 834 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 CD247P20963 164 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 OR10H4Q8NGA5 316 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 C9orf43Q8TAL5 461 aaPredicted RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 CLP1Q92989 425 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 ARL8BQ9NVJ2 186 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 KLK14Q9P0G3 267 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 CYTH4Q9UIA0 394 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 MAP3K6O95382 1288 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 MAGEA8P43361 318 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 METTL16Q86W50 562 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 MRPL41Q8IXM3 137 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 ZCCHC9Q8N567 271 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 FERD3LQ96RJ6 166 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 GDAP2Q9NXN4 497 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 A0A087X0B3 334 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 COX4I1P13073 169 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 PHC1P78364 1004 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 FBXO47Q5MNV8 452 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 BRSK1Q8TDC3 778 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 GPATCH1Q9BRR8 931 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 ASB8Q9H765 288 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 RBMX2Q9Y388 322 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 MMP10P09238 476 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 GRIA4P48058 902 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 PAN2Q504Q3 1202 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 BEND4Q6ZU67 534 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 KIAA1683Q9H0B3 1180 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 FPGTO14772 594 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 GBX2P52951 348 aaPredicted RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 HERV-K104P61576 105 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 PIWIL4Q7Z3Z4 852 aaKnown RBP17.53■□□□□ 0.4
SMAD4-201ENST00000342988 CYP2U1Q7Z449 544 aa17.53■□□□□ 0.4
SMAD4-201ENST00000342988 ADAMTS15Q8TE58 950 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms