RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TAB1Q15750 504 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 PRR23BQ6ZRT6 265 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 HIPK1Q86Z02 1210 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 AHI1Q8N157 1196 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 HDDC3Q8N4P3 179 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 ATP6V1C2Q8NEY4 427 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 UBASH3BQ8TF42 649 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 HMCESQ96FZ2 354 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 TRAPPC9Q96Q05 1148 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 MIOSQ9NXC5 875 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-202ENST00000342494 TMEM131LA2VDJ0 1609 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 LRIG2O94898 1065 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 DRG2P55039 364 aaKnown RBP14.93□□□□□ -0.02
UBE3B-202ENST00000342494 GDF6Q6KF10 455 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-202ENST00000342494 TMC8Q8IU68 726 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 GBA3Q9H227 469 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 TMEM27Q9HBJ8 222 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 LRTM1Q9HBL6 345 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 LRCH1Q9Y2L9 728 aa14.93□□□□□ -0.02
UBE3B-202ENST00000342494 L1CAMP32004 1257 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 UBR7Q8N806 425 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 POP5Q969H6 163 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 RBM18Q96H35 190 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 TBATAQ96M53 351 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 SLC25A51Q9H1U9 297 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 OGDHLQ9ULD0 1010 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 PBX3P40426 434 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 DHDDSQ86SQ9 333 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 ZNF540Q8NDQ6 660 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 JSRP1Q96MG2 331 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 SEC14L3Q9UDX4 400 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 MAGEB3O15480 346 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 VARSP26640 1264 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 S100GP29377 79 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 HOXC12P31275 282 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 ASMTP46597 345 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 C2orf80Q0P641 193 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 PDK4Q16654 411 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 DUPD1Q68J44 220 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 ADCY4Q8NFM4 1077 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 VANGL1Q8TAA9 524 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 EXOSC8Q96B26 276 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 GAL3ST4Q96RP7 486 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 SRMSQ9H3Y6 488 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 NEUROD4Q9HD90 331 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 ABCB8Q9NUT2 735 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 COL20A1Q9P218 1284 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 XKRYO14609 159 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 DHX15O43143 795 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 LAMP2P13473 410 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 TPSB2P20231 275 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 ZNF280AP59817 542 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 SRP54P61011 504 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 LARS2Q15031 903 aaKnown RBP14.92□□□□□ -0.02
UBE3B-202ENST00000342494 TPSAB1Q15661 275 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 C2orf27AQ580R0 203 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 RCN3Q96D15 328 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 CDH19Q9H159 772 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 CXorf56Q9H5V9 222 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 HCN3Q9P1Z3 774 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 INSL6Q9Y581 213 aa14.92□□□□□ -0.02
UBE3B-202ENST00000342494 OR1F1O43749 312 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 LYPLA1O75608 230 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 PSMG1O95456 288 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 MYL9P24844 172 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 NDST2P52849 883 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 NRG1Q02297 640 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 UBAP2LQ14157 1087 aaKnown RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 CCL14Q16627 93 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ARMC3Q5W041 872 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 TMEM220Q6QAJ8 160 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 CXXC5Q7LFL8 322 aaKnown RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 PRSS58Q8IYP2 241 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ZCCHC10Q8TBK6 192 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 PAIP1Q9H074 479 aaKnown RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ARVCFO00192 962 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 CLDN9O95484 217 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 C2P06681 752 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 KIR3DL1P43629 444 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 MED27Q6P2C8 311 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 IKBIPQ70UQ0 350 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 OAFQ86UD1 273 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 FAM124BQ9H5Z6 455 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 OMPP47874 163 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 TPGS2Q68CL5 300 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 CADM2Q8N3J6 435 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 WFIKKN2Q8TEU8 576 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 STK32AQ8WU08 396 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 KLK6Q92876 244 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ANKRD27Q96NW4 1050 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 CHRAC1Q9NRG0 131 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 EHD3Q9NZN3 535 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 ASB3Q9Y575 518 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 FAM86C2PA6NEL3 165 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 MATN3O15232 486 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 JAZF1Q86VZ6 243 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 PLD5Q8N7P1 536 aa14.91□□□□□ -0.02
UBE3B-202ENST00000342494 RTL3Q8N8U3 475 aaKnown RBP14.91□□□□□ -0.02
UBE3B-202ENST00000342494 SLC4A11Q8NBS3 891 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms