RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 SSR2P43308 183 aa19.47■□□□□ 0.71
SEMA6C-201ENST00000341697 SLC9A4Q6AI14 798 aa19.47■□□□□ 0.71
SEMA6C-201ENST00000341697 GCNT7Q6ZNI0 430 aa19.47■□□□□ 0.71
SEMA6C-201ENST00000341697 TMEM40Q8WWA1 233 aa19.47■□□□□ 0.71
SEMA6C-201ENST00000341697 PANX1Q96RD7 426 aa19.47■□□□□ 0.71
SEMA6C-201ENST00000341697 ZNF490Q9ULM2 529 aaPredicted RBP19.47■□□□□ 0.71
SEMA6C-201ENST00000341697 TRBV23OR9-2A0A075B6M9 112 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 CCR4P51679 360 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 SLC1A5Q15758 541 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 LRRC73Q5JTD7 316 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 DEPDC1Q5TB30 811 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 ATG10Q9H0Y0 220 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 FANCEQ9HB96 536 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 CD248Q9HCU0 757 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 SERPINI2O75830 405 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 ZNF572Q7Z3I7 529 aaPredicted RBP19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 NAT8LQ8N9F0 302 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 TMEM209Q96SK2 561 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 FLRT1Q9NZU1 646 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 POLR3HQ9Y535 204 aaPredicted RBP19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 SLC22A3O75751 556 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 UQCRBP14927 111 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 NOS3P29474 1203 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 TIE1P35590 1138 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 IL5RAQ01344 420 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 GDPD5Q8WTR4 605 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 CLIP3Q96DZ5 547 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 MRPL48Q96GC5 212 aaKnown RBP19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 AGAP2Q99490 1192 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 IPPKQ9H8X2 491 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 GNPDA1P46926 289 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 GPR33Q49SQ1 333 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 GPR135Q8IZ08 494 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 BHLHE22Q8NFJ8 381 aaPredicted RBP19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 PPCDCQ96CD2 204 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 VMP1Q96GC9 406 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 ITCHQ96J02 903 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 SSU72Q9NP77 194 aaKnown RBP19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 PDP2Q9P2J9 529 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 ANGPT4Q9Y264 503 aa19.46■□□□□ 0.71
SEMA6C-201ENST00000341697 MBLAC1A4D2B0 266 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 WNT9AO14904 365 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 LRATO95237 230 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CLDN9O95484 217 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 APOA1P02647 267 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 DYNC1I2Q13409 638 aaKnown RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 C2orf73Q8N5S3 287 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 FBXO30Q8TB52 745 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 OR52E6Q96RD3 313 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 SPATA5L1Q9BVQ7 753 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 DZANK1Q9NVP4 752 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ZNF780BQ9Y6R6 833 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 LEFTY2O00292 366 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 BRAT1Q6PJG6 821 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 SPATA19Q7Z5L4 167 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ZDHHC13Q8IUH4 622 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ZC3H7AQ8IWR0 971 aaKnown RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CYP2S1Q96SQ9 504 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 TMEM79Q9BSE2 394 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 C9orf16Q9BUW7 83 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 OSBPL6Q9BZF3 934 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 RPS6KA6Q9UK32 745 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 SLC1A2P43004 574 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 COPZ1P61923 177 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CASP12Q6UXS9 341 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CPNE9Q8IYJ1 553 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ZNF276Q8N554 614 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 REEP1Q9H902 201 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 OR10H1Q9Y4A9 318 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 RFXANKO14593 260 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 PROZP22891 400 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 GALNT2Q10471 571 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ADRM1Q16186 407 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 TRMT10BQ6PF06 316 aaKnown RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 SIDT2Q8NBJ9 832 aaKnown RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CYB5D2Q8WUJ1 264 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ZNF514Q96K75 400 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CCDC177Q9NQR7 707 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 TMEM248Q9NWD8 314 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CCDC162PA2VCL2 907 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 C8GP07360 202 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 TYRP14679 529 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 HSPA7P48741 367 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 B3GNT9Q6UX72 402 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 C15orf39Q6ZRI6 1047 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 CHST15Q7LFX5 561 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 C16orf62Q7Z3J2 963 aa19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ALYREFQ86V81 257 aaKnown RBP19.45■□□□□ 0.7
SEMA6C-201ENST00000341697 ZNF33AQ06730 810 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 SULT1C3Q6IMI6 304 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 PDE12Q6L8Q7 609 aaKnown RBP19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 OR13C4Q8NGS5 318 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 AZIN2Q96A70 460 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 C19orf60Q96EN9 201 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 NOL11Q9H8H0 719 aaKnown RBP19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 FETUBQ9UGM5 382 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 DUSP12Q9UNI6 340 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 COL18A1P39060 1754 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 TAS2R39P59534 338 aa19.44■□□□□ 0.7
SEMA6C-201ENST00000341697 MRPS22P82650 360 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms