RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CMKLR1Q99788 373 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 SEMA6CQ9H3T2 930 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 RDH14Q9HBH5 336 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 ARFGAP3Q9NP61 516 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 ATXN10Q9UBB4 475 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 NFKBIL1Q9UBC1 381 aaPredicted RBP19.96■□□□□ 0.79
SYNE2-201ENST00000341472 PISDQ9UG56 409 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 PCDHGA7Q9Y5G6 932 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 SPO11Q9Y5K1 396 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 PCYT1BQ9Y5K3 369 aaPredicted RBP19.96■□□□□ 0.79
SYNE2-201ENST00000341472 ANKRD36A6QL64 1941 aa19.96■□□□□ 0.79
SYNE2-201ENST00000341472 BTNL10A8MVZ5 291 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 AGRPO00253 132 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 ZNF8P17098 575 aaPredicted RBP19.95■□□□□ 0.78
SYNE2-201ENST00000341472 BPIP17213 487 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 SLC5A2P31639 672 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 CTNNA1P35221 906 aaKnown RBP19.95■□□□□ 0.78
SYNE2-201ENST00000341472 CETN2P41208 172 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 CXADRP78310 365 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 ZNF648Q5T619 568 aaPredicted RBP19.95■□□□□ 0.78
SYNE2-201ENST00000341472 PDPK2PQ6A1A2 396 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 TMPRSS9Q7Z410 1059 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 SLC25A41Q8N5S1 370 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 GLYATL1Q969I3 302 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 SLC38A3Q99624 504 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 FERMT1Q9BQL6 677 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 LACRTQ9GZZ8 138 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 OR2AG1Q9H205 316 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 TRABDQ9H4I3 376 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 KCNK4Q9NYG8 393 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 TBC1D29Q9UFV1 150 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 KCNK6Q9Y257 313 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 EFR3BQ9Y2G0 817 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 REXO2Q9Y3B8 237 aaKnown RBP19.95■□□□□ 0.78
SYNE2-201ENST00000341472 IGSF10Q6WRI0 2623 aa19.95■□□□□ 0.78
SYNE2-201ENST00000341472 PTPRQQ9UMZ3 2332 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 APOC4-APOC2K7ER74 178 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 AURKAO14965 403 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 SNX2O60749 519 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 EML2O95834 649 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 APOC2P02655 101 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 ACP5P13686 325 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 SQSTM1Q13501 440 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 SIRPB2Q5JXA9 342 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 NKAIN2Q5VXU1 208 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 IYDQ6PHW0 289 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 ZNF574Q6ZN55 896 aaPredicted RBP19.94■□□□□ 0.78
SYNE2-201ENST00000341472 SFRP1Q8N474 314 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 SLC37A2Q8TED4 501 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 OXNAD1Q96HP4 312 aaPredicted RBP19.94■□□□□ 0.78
SYNE2-201ENST00000341472 UBL7Q96S82 380 aaPredicted RBP19.94■□□□□ 0.78
SYNE2-201ENST00000341472 BAG1Q99933 345 aaPredicted RBP19.94■□□□□ 0.78
SYNE2-201ENST00000341472 NUDT22Q9BRQ3 303 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 OSBPL8Q9BZF1 889 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 BPIFA1Q9NP55 256 aa19.94■□□□□ 0.78
SYNE2-201ENST00000341472 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.94■□□□□ 0.78
SYNE2-201ENST00000341472 IGHV1OR21-1A0A087WYE8 117 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 CCDC66A2RUB6 948 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 GPR89AB7ZAQ6 455 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 F5H423 210 aaPredicted RBP19.93■□□□□ 0.78
SYNE2-201ENST00000341472 NVLO15381 856 aaKnown RBP19.93■□□□□ 0.78
SYNE2-201ENST00000341472 GPR89BP0CG08 455 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 CTNNA2P26232 953 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 RBL1P28749 1068 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 FASLGP48023 281 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 RWDD2BP57060 319 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 TMPRSS3P57727 454 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 MPP3Q13368 585 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 ADGRG6Q86SQ4 1221 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 KIAA1328Q86T90 577 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 ACRBPQ8NEB7 543 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 IPMKQ8NFU5 416 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 SH3KBP1Q96B97 665 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 MRGPRX2Q96LB1 330 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 DPYSL5Q9BPU6 564 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 C10orf88Q9H8K7 445 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 HACD3Q9P035 362 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 RSPH14Q9UHP6 348 aa19.93■□□□□ 0.78
SYNE2-201ENST00000341472 OR5K4A6NMS3 321 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 EIF4E1BA6NMX2 242 aaKnown RBP19.92■□□□□ 0.78
SYNE2-201ENST00000341472 PJA2O43164 708 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 SLC2A4P14672 509 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 HMGCLP35914 325 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 CHRNA4P43681 627 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 PPM1FP49593 454 aaPredicted RBP19.92■□□□□ 0.78
SYNE2-201ENST00000341472 VAV2P52735 878 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 C16orf72Q14CZ0 275 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 NOMO1Q15155 1222 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 ZDHHC20Q5W0Z9 365 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 PHYKPLQ8IUZ5 450 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 ACTL9Q8TC94 416 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 AHCYL2Q96HN2 611 aaKnown RBP19.92■□□□□ 0.78
SYNE2-201ENST00000341472 BBC3Q96PG8 261 aaPredicted RBP19.92■□□□□ 0.78
SYNE2-201ENST00000341472 PLEKHG4BQ96PX9 1271 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 HERPUD2Q9BSE4 406 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 CPNE5Q9HCH3 593 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 SARS2Q9NP81 518 aaKnown RBP19.92■□□□□ 0.78
SYNE2-201ENST00000341472 SSUH2Q9Y2M2 353 aa19.92■□□□□ 0.78
SYNE2-201ENST00000341472 UNC13CQ8NB66 2214 aa19.91■□□□□ 0.78
SYNE2-201ENST00000341472 IGHV5-10-1A0A0J9YXX1 117 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms