RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RBFAQ8N0V3 343 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 HDDC3Q8N4P3 179 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 AADATQ8N5Z0 425 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 BCAS4Q8TDM0 211 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 ZNF75CPQ92670 426 aaPredicted RBP14.58□□□□□ -0.08
CBX3-201ENST00000337620 RIOK2Q9BVS4 552 aaKnown RBP14.58□□□□□ -0.08
CBX3-201ENST00000337620 P2RY12Q9H244 342 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 RAD18Q9NS91 495 aa14.58□□□□□ -0.08
CBX3-201ENST00000337620 SRRM3A6NNA2 597 aaPredicted RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 AGAP14A8MT82 685 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 H0Y858 1186 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 WNT9AO14904 365 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 MMP20O60882 483 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 NIPSNAP2O75323 286 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 ESR1P03372 595 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 TAC1P20366 129 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 C5AR1P21730 350 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 DRD3P35462 400 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 COPAP53621 1224 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 ADARP55265 1226 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 RPS14P62263 151 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 MRPS21P82921 87 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 FAM83EQ2M2I3 478 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 ZNF284Q2VY69 593 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 PUS10Q3MIT2 529 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 PIP5KL1Q5T9C9 394 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 PTRHD1Q6GMV3 140 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 TMEM207Q6UWW9 146 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CPLX4Q7Z7G2 160 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CLDN19Q8N6F1 224 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 RPLP0P6Q8NHW5 317 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 HEXDCQ8WVB3 486 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 ANKRD49Q8WVL7 239 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 RAB7BQ96AH8 199 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CCT8L2Q96SF2 557 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 MKRN2Q9H000 416 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 PRDM6Q9NQX0 595 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 SLC2A4RGQ9NR83 387 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CPSF2Q9P2I0 782 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 NDRG2Q9UN36 371 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 TRIOO75962 3097 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CKAP5Q14008 2032 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 A0A1W2PP55 124 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 A0A1W2PQF6 199 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 RGSL1A5PLK6 1076 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 IQCF5A8MTL0 148 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 LOC730098B7Z3J9 87 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 E5RI56 91 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 PSMD11O00231 422 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 LZTS3O60299 673 aaPredicted RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 RNASEH2AO75792 299 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 C6P13671 934 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 COL9A1P20849 921 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 BGNP21810 368 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 DCDC1P59894 354 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 LCA5Q86VQ0 697 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CXorf40AQ8TE69 158 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 GANCQ8TET4 914 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 ULK4Q96C45 1275 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 AP2M1Q96CW1 435 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 COPS8Q99627 209 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 GPR21Q99679 349 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CDH19Q9H159 772 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 SLC6A17Q9H1V8 727 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 MANSC1Q9H8J5 431 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 SARS2Q9NP81 518 aaKnown RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 ZDHHC3Q9NYG2 299 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.57□□□□□ -0.08
CBX3-201ENST00000337620 GALPQ9UBC7 116 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 MED16Q9Y2X0 877 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 PCDHB1Q9Y5F3 818 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 FADS3Q9Y5Q0 445 aa14.57□□□□□ -0.08
CBX3-201ENST00000337620 SHISA7A6NL88 538 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 VPS26AO75436 327 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 PYGLP06737 847 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 BPGMP07738 259 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 LTA4HP09960 611 aaKnown RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 GM2AP17900 193 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 KCNA4P22459 653 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 TSNAXIP1Q2TAA8 658 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 FBXO43Q4G163 708 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 TMEM52BQ4KMG9 183 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 HABP4Q5JVS0 413 aaKnown RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 HENMT1Q5T8I9 393 aaKnown RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 AGAP9Q5VTM2 703 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 LRRC8EQ6NSJ5 796 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 TMPRSS6Q8IU80 811 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 NRSN1Q8IZ57 195 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 FSTL5Q8N475 847 aaPredicted RBP14.56□□□□□ -0.08
CBX3-201ENST00000337620 TRAM1L1Q8N609 369 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 MSANTD3Q96H12 275 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 UBXN10Q96LJ8 280 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 COQ10AQ96MF6 247 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 GPR78Q96P69 363 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 ZSCAN5AQ9BUG6 496 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 POPDC3Q9HBV1 291 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 IGSF5Q9NSI5 407 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 SERGEFQ9UGK8 458 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 COMMD10Q9Y6G5 202 aa14.56□□□□□ -0.08
CBX3-201ENST00000337620 PRSS21Q9Y6M0 314 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms