RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ANKRD49Q8WVL7 239 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 MYO19Q96H55 970 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 PPP1R16AQ96I34 528 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 DNAJC1Q96KC8 554 aaKnown RBP13.68□□□□□ -0.22
RTN4-202ENST00000337526 CORO1BQ9BR76 489 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 MAF1Q9H063 256 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 RHBGQ9H310 441 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 FBXW11Q9UKB1 542 aa13.68□□□□□ -0.22
RTN4-202ENST00000337526 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.68□□□□□ -0.221e-12■■□□□ 13.7
RTN4-202ENST00000337526 H0YGN5 161 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 TRBC1P01850 177 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 HOXD13P35453 343 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 OLR1P78380 273 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 PITRM1Q5JRX3 1037 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 TMEM198Q66K66 360 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 SATL1Q86VE3 508 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 MPP5Q8N3R9 675 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ASZ1Q8WWH4 475 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 PPCDCQ96CD2 204 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 COQ10BQ9H8M1 238 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 HMGXB4Q9UGU5 601 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 RAPGEFL1Q9UHV5 662 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ASF1AQ9Y294 204 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ARIH1Q9Y4X5 557 aaPredicted RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 PCDHGC4Q9Y5F7 938 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 NFS1Q9Y697 457 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 CXorf49A8MYA2 514 aaPredicted RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 UBXN8O00124 270 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 SLC7A4O43246 635 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 UROSP10746 265 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 CYP3A5P20815 502 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 IGFBP5P24593 272 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 HSPA7P48741 367 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 GPAT3Q53EU6 434 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 KHDRBS2Q5VWX1 349 aaKnown RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 PTCHD4Q6ZW05 846 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 OR52L1Q8NGH7 329 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 VMP1Q96GC9 406 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 SNX27Q96L92 541 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ACBD6Q9BR61 282 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 AARSD1Q9BTE6 412 aaKnown RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 ADI1Q9BV57 179 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ZSCAN32Q9NX65 697 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 CCDC182A6NF36 153 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 PIP5K1BO14986 540 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 UGT2B11O75310 529 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ANGPTL1O95841 491 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 TLX1P31314 330 aaPredicted RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 CCR4P51679 360 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ADGRE1Q14246 886 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 PNPT1Q8TCS8 783 aaKnown RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 FNDC11Q9BVV2 318 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 SSR3Q9UNL2 185 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 NFAT5O94916 1531 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 NEMP2A6NFY4 417 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 FANCGO15287 622 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 NUDT14O95848 222 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 BMP7P18075 431 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 SLC9B1Q4ZJI4 515 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 FAM182AQ5T1J6 154 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 DDI2Q5TDH0 399 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 C16orf62Q7Z3J2 963 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 UNC5BQ8IZJ1 945 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 TTPALQ9BTX7 342 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 KCTD5Q9NXV2 234 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
RTN4-202ENST00000337526 SLC17A6Q9P2U8 582 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 FBXO10Q9UK96 956 aa13.67□□□□□ -0.22
RTN4-202ENST00000337526 H0Y858 1186 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 OR4F21O95013 312 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 FADS2O95864 444 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 SLC9A5Q14940 896 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 C6orf89Q6UWU4 347 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 TMEM192Q8IY95 271 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 ZNF395Q9H8N7 513 aaPredicted RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 ZNF536O15090 1300 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 GLYATL1P3A0A0U1RQE8 302 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 BCKDKO14874 412 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 PIGRP01833 764 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 CAPN1P07384 714 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 MAGP20916 626 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 TACR2P21452 398 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 NR4A1P22736 598 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 CCL23P55773 120 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 GPX6P59796 221 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 COPZ1P61923 177 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 KIAA0930Q6ICG6 404 aaPredicted RBP13.66□□□□□ -0.22
RTN4-202ENST00000337526 SERPINA13PQ6UXR4 307 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 CXorf40AQ8TE69 158 aa13.66□□□□□ -0.22
RTN4-202ENST00000337526 ZNF607Q96SK3 696 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms