RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PLAAQ9Y263 795 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 HMX2A2RU54 273 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 METTL12A8MUP2 240 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 NDUFS2O75306 463 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 AHSGP02765 367 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 HOXA6P31267 233 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 GPR1P46091 355 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 CCDC6Q16204 474 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 PRAMEF14Q5SWL7 426 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 ZNF549Q6P9A3 640 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 AFTPHQ6ULP2 937 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 TRMT10CQ7L0Y3 403 aaKnown RBP16.37■□□□□ 0.21
SHOX-201ENST00000334060 CILP2Q8IUL8 1156 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 CYP4X1Q8N118 509 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 OR13H1Q8NG92 308 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 ZIM3Q96PE6 472 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 ACSS3Q9H6R3 686 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 TMEM202A6NGA9 273 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 MAP3K13O43283 966 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 S1PR4O95977 384 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 HADHAP40939 763 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 CTSCP53634 463 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 DCDC1P59894 354 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
SHOX-201ENST00000334060 MARK2Q7KZI7 788 aaKnown RBP16.37■□□□□ 0.21
SHOX-201ENST00000334060 C10orf67Q8IYJ2 551 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 MREGQ8N565 214 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 SERAC1Q96JX3 654 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 SMOC1Q9H4F8 434 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 MED4Q9NPJ6 270 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 TM7SF3Q9NS93 570 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 FBXO5Q9UKT4 447 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 RIMKLBQ9ULI2 386 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 SLC30A1Q9Y6M5 507 aa16.37■□□□□ 0.21
SHOX-201ENST00000334060 A0A1W2PPC4 97 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 AGAP14A8MT82 685 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 SGTAO43765 313 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 MCM3P25205 808 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 OXTRP30559 389 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 CDK3Q00526 305 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 PPARDQ03181 441 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 MGAT5Q09328 741 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 CASP8Q14790 479 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 ZNF542PQ5EBM4 170 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 SWT1Q5T5J6 900 aaKnown RBP16.36■□□□□ 0.21
SHOX-201ENST00000334060 PDPK2PQ6A1A2 396 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 NLRP9Q7RTR0 991 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 SNX20Q7Z614 316 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 NXPE1Q8N323 547 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 TRAM1L1Q8N609 369 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 PRSS33Q8NF86 280 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 C1orf216Q8TAB5 229 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 GAB3Q8WWW8 586 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 NAT9Q9BTE0 207 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 MCMBPQ9BTE3 642 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 KDM4CQ9H3R0 1056 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 CAB39LQ9H9S4 337 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 ZFATQ9P243 1243 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 TBK1Q9UHD2 729 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 CRLS1Q9UJA2 301 aa16.36■□□□□ 0.21
SHOX-201ENST00000334060 ITGB6P18564 788 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 ACRV1P26436 265 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PDE1BQ01064 536 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 CACNG1Q06432 222 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 DPTQ07507 201 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 THOC5Q13769 683 aaKnown RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 ZNF460Q14592 562 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PLK5Q496M5 336 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 FASTKD1Q53R41 847 aaKnown RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 CTSL3PQ5NE16 218 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 STRA8Q7Z7C7 330 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 ZBTB44Q8NCP5 570 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 C2CD4AQ8NCU7 369 aaPredicted RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 GDAP1Q8TB36 358 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.35■□□□□ 0.21
SHOX-201ENST00000334060 SGF29Q96ES7 293 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 SPACA7Q96KW9 195 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PAFAH2Q99487 392 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 SLC30A3Q99726 388 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 TACO1Q9BSH4 297 aaKnown RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 FBXO4Q9UKT5 387 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 MED16Q9Y2X0 877 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PLEKHM1Q9Y4G2 1056 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 ST14Q9Y5Y6 855 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 SPAG17Q6Q759 2223 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 MUC6Q6W4X9 2439 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 OR2AG2A6NM03 316 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 GALR2O43603 387 aaPredicted RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 HNRNPA2B1P22626 353 aaKnown RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 DHPSP49366 369 aaPredicted RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 TIAL1Q01085 375 aaKnown RBP eCLIP16.35■□□□□ 0.21
SHOX-201ENST00000334060 CCDC15Q0P6D6 951 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 TCF15Q12870 199 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 AGERQ15109 404 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 HSP90B2PQ58FF3 399 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PMS2CLQ68D20 193 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 NEK5Q6P3R8 708 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PACS1Q6VY07 963 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 PIM3Q86V86 326 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms