RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 SLC17A4Q9Y2C5 497 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 TCAF1Q9Y4C2 921 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 CSNK1G3Q9Y6M4 447 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 GOLGA4Q13439 2230 aaKnown RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 PCNX2A6NKB5 2137 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 GPR89AB7ZAQ6 455 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 SH3BP5O60239 455 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 ZFC3H1O60293 1989 aaKnown RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 AVILO75366 819 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 GPR89BP0CG08 455 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 COL5A1P20908 1838 aaPredicted RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 ADRA1DP25100 572 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 SESN2P58004 480 aaPredicted RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 SLC7A5Q01650 507 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 DNAH14Q0VDD8 3507 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 CBLBQ13191 982 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 DBX2Q6ZNG2 339 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 PTCD2Q8WV60 388 aaKnown RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 SCG3Q8WXD2 468 aaKnown RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 OR1E3Q8WZA6 343 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 PEX13Q92968 403 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 TTC25Q96NG3 672 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 RMI1Q9H9A7 625 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 CARS2Q9HA77 564 aaKnown RBP20.34■□□□□ 0.85
MRPL40-201ENST00000333130 EVA1BQ9NVM1 165 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 FKBPLQ9UIM3 349 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 ANAPC5Q9UJX4 755 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 KCTD3Q9Y597 815 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 SLC30A1Q9Y6M5 507 aa20.34■□□□□ 0.85
MRPL40-201ENST00000333130 CEACAM5P06731 702 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 IVLP07476 585 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 ITGALP20701 1170 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 MGAT1P26572 445 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 TMPRSS15P98073 1019 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 CALCOCO2Q13137 446 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 PEX6Q13608 980 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 GTF2H3Q13889 308 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 ATP13A5Q4VNC0 1218 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 PCID2Q5JVF3 399 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 LDLRAP1Q5SW96 308 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 TRIM74Q86UV6 250 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 GKN2Q86XP6 184 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 GALNT13Q8IUC8 556 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 RBFAQ8N0V3 343 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 AGGF1Q8N302 714 aaeCLIP20.33■□□□□ 0.84
MRPL40-201ENST00000333130 OR13C4Q8NGS5 318 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 ULK4Q96C45 1275 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 DNAJC1Q96KC8 554 aaKnown RBP20.33■□□□□ 0.84
MRPL40-201ENST00000333130 LRRC61Q9BV99 259 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 MRM3Q9HC36 420 aaKnown RBP20.33■□□□□ 0.84
MRPL40-201ENST00000333130 NLE1Q9NVX2 485 aaPredicted RBP20.33■□□□□ 0.84
MRPL40-201ENST00000333130 SYBUQ9NX95 663 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 NLGN3Q9NZ94 848 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 FTSJ1Q9UET6 329 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 DMGDHQ9UI17 866 aaKnown RBP20.33■□□□□ 0.84
MRPL40-201ENST00000333130 KLF15Q9UIH9 416 aa20.33■□□□□ 0.84
MRPL40-201ENST00000333130 ARID1BQ8NFD5 2236 aaPredicted RBP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 GAPDHSO14556 408 aaPredicted RBP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 SCAMP1O15126 338 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 FFAR2O15552 330 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 SRP72O76094 671 aaKnown RBP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 ANXA6P08133 673 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 CEACAM1P13688 526 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 GNPDA1P46926 289 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 NOVA1P51513 510 aaKnown RBP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 CRADDP78560 199 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 ACVR1Q04771 509 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 ILF3Q12906 894 aaKnown RBP eCLIP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 CHRNA6Q15825 494 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 CCDC38Q502W7 563 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 PIP4P1Q86T03 277 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 EID2Q8N6I1 236 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 DEFB124Q8NES8 71 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 ZNF398Q8TD17 642 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 GLMNQ92990 594 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 ART4Q93070 314 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 KIFC1Q9BW19 673 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 ASB8Q9H765 288 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 SUDS3Q9H7L9 328 aaPredicted RBP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 TRIM39Q9HCM9 518 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 MRPL40Q9NQ50 206 aaKnown RBP20.32■□□□□ 0.84
MRPL40-201ENST00000333130 SMOXQ9NWM0 555 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 SAMD15Q9P1V8 674 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 CRLS1Q9UJA2 301 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 PCOLCE2Q9UKZ9 415 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 SUFUQ9UMX1 484 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 TMEM98Q9Y2Y6 226 aa20.32■□□□□ 0.84
MRPL40-201ENST00000333130 LMO7DNF2Z398 122 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 H7C0S8 307 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 TM4SF5O14894 197 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 VEGFDO43915 354 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 KCNA4P22459 653 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 GUCY2DQ02846 1103 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 CAV1Q03135 178 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 NFATC2Q13469 925 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 PTPRCAPQ14761 206 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 TRADDQ15628 312 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 TSTD2Q5T7W7 516 aa20.31■□□□□ 0.84
MRPL40-201ENST00000333130 ZDHHC24Q6UX98 284 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms