RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 GMDSO60547 372 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 VNN2O95498 520 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 NTSR2O95665 410 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PORP16435 677 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 AP2S1P53680 142 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PRKCZQ05513 592 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PLEKHG4Q58EX7 1191 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 LPCAT1Q8NF37 534 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PCDHGB6Q9Y5F9 930 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 TRAFD1O14545 582 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 IRF1P10914 325 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CYP20A1Q6UW02 462 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CEP41Q9BYV8 373 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SLA2Q9H6Q3 261 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MGAT4BQ9UQ53 548 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CAPN6Q9Y6Q1 641 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 FAM196BA6NMK8 535 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MPZL2O60487 215 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CHRNB1P11230 501 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 RTP1P59025 263 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SLC6A3Q01959 620 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ERI1Q8IV48 349 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ADARB2Q9NS39 739 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PCDHA11Q9Y5I1 949 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SIGLEC16A6NMB1 481 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MID1O15344 667 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 TPST1O60507 370 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PENKP01210 267 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ALDH2P05091 517 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PRMT6Q96LA8 375 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 FTH1P02794 183 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SLC2A4P14672 509 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ACSM2AQ08AH3 577 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ACSM2BQ68CK6 577 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SSX7Q7RTT5 188 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 FIG4Q92562 907 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF416Q9BWM5 594 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 LRMDAQ9H2I8 198 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 TMEM184CQ9NVA4 438 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 INTS7Q9NVH2 962 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 KCTD5Q9NXV2 234 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 TAS2R7Q9NYW3 318 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PLK2Q9NYY3 685 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MTF2Q9Y483 593 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 BTN3A1O00481 513 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SLC22A1O15245 554 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 RNASEH2AO75792 299 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CTDNEP1O95476 244 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MECP2P51608 486 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 GPR107Q5VW38 600 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF470Q6ECI4 717 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SNX20Q7Z614 316 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 HIPK1Q86Z02 1210 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 HSFY1Q96LI6 401 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SULT1C2O00338 296 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 JCHAINP01591 159 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 HMBSP08397 361 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SLC13A2Q13183 592 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 DDX39BQ13838 428 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CARNMT1Q8N4J0 409 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 THAP6Q8TBB0 222 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 NUSAP1Q9BXS6 441 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 A0A0G2JMP0 313 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 H3BNH8 94 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 FGRP09769 529 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CPA2P48052 419 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SULT2A1Q06520 285 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PCDH1Q08174 1060 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 EFEMP1Q12805 493 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 POU6F1Q14863 301 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 HPS6Q86YV9 775 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 OR4M2Q8NGB6 313 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SAMD11Q96NU1 681 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 TSPAN16Q9UKR8 245 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SPATA31A1Q5TZJ5 1347 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 E2F3O00716 465 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 NUDT17P0C025 328 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PSMA1P25786 263 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 NDUFAF5Q5TEU4 345 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 MFSD2AQ8NA29 543 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SEC22BO75396 215 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ASGR1P07306 291 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 CTSHP09668 335 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 RPL26P61254 145 aaKnown RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ATG9BQ674R7 924 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF606Q8WXB4 792 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-201ENST00000322507 NECTIN3Q9NQS3 549 aa9.68□□□□□ -0.86
COL12A1-201ENST00000322507 SLC37A4O43826 429 aa9.67□□□□□ -0.86
COL12A1-201ENST00000322507 ANPEPP15144 967 aa9.67□□□□□ -0.86
COL12A1-201ENST00000322507 GMPSP49915 693 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms