RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 OAZ1P54368 228 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 DCST1Q5T197 706 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNF490Q9ULM2 529 aaPredicted RBP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TIMM13Q9Y5L4 95 aaPredicted RBP16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 KANTRA0A1W2PQU2 76 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 NPEPPSL1A6NEC2 478 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 S100A12P80511 92 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TRIM74Q86UV6 250 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TRIM73Q86UV7 250 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 PGLYRP2Q96PD5 576 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TCF25Q9BQ70 676 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 COPS4Q9BT78 406 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 ANKRA2Q9H9E1 313 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 CXorf21Q9HAI6 301 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 BLOC1S4Q9NUP1 217 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 A0A087X0B3 334 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 EFCAB9A8MZ26 197 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TSPAN18Q96SJ8 248 aa16.79■□□□□ 0.28
SMCHD1-201ENST00000320876 TNFRSF11BO00300 401 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 IPO13O94829 963 aaKnown RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 PDCD4Q53EL6 469 aaKnown RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 LACTB2Q53H82 288 aaPredicted RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 ZDHHC20Q5W0Z9 365 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 TUBGCP5Q96RT8 1024 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 LRTM1Q9HBL6 345 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 WDR37Q9Y2I8 494 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC27A6Q9Y2P4 619 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 LRRC10BA6NIK2 292 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 PHF13Q86YI8 300 aaPredicted RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 MRPS33Q9Y291 106 aaKnown RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 GJB6O95452 261 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 GOT1P17174 413 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 ZCCHC12Q6PEW1 402 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SNX20Q7Z614 316 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SPATA6LQ8N4H0 392 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 CBR4Q8N4T8 237 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SUSD6Q92537 303 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 CXorf40BQ96DE9 158 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 TNFSF13BQ9Y275 285 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SHOX2O60902 331 aaPredicted RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 CREMQ03060 361 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 CNPY1Q3B7I2 92 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 VPS26BQ4G0F5 336 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 TCEAL6Q6IPX3 200 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SRFBP1Q8NEF9 429 aaKnown RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 PPM1MQ96MI6 270 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SMPD4Q9NXE4 827 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNF208O43345 1280 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 GRSF1Q12849 480 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC22A2O15244 555 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 SERPINA3P01011 423 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 ABL2P42684 1182 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 DNASE1L1P49184 302 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 DEFA5Q01523 94 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 NMUR2Q9GZQ4 415 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 IFNW1P05000 195 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 COL6A2P12110 1019 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 PLEKHG6Q3KR16 790 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 GLYATQ6IB77 296 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 RANBP3LQ86VV4 465 aaPredicted RBP16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 PIGXQ8TBF5 258 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 PORCNQ9H237 461 aa16.78■□□□□ 0.28
SMCHD1-201ENST00000320876 H6PDO95479 791 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC5A3P53794 718 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 SMU1Q2TAY7 513 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 REP15Q6BDI9 236 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 BBS12Q6ZW61 710 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 USP30Q70CQ3 517 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 DNAJB7Q7Z6W7 309 aaPredicted RBP16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 CSDE1O75534 798 aaKnown RBP16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 ANKRD26P1Q6NSI1 321 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC30A8Q8IWU4 369 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 PNPOQ9NVS9 261 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 SLC17A7Q9P2U7 560 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 OR7A10O76100 309 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 CTBP1Q13363 440 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 FAM35AQ86V20 835 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 UBR7Q8N806 425 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 LRRC4CQ9HCJ2 640 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 ATPIF1Q9UII2 106 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 RAB23Q9ULC3 237 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 AXIN1O15169 862 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 ALOX15BO15296 676 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 OR2B6P58173 313 aa16.77■□□□□ 0.28
SMCHD1-201ENST00000320876 H0Y858 1186 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 PEPDP12955 493 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 FSHRP23945 695 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 GNPDA1P46926 289 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 GMPSP49915 693 aaPredicted RBP16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 GRM3Q14832 879 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 PPM1LQ5SGD2 360 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 UROC1Q96N76 676 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 SNRNP25Q9BV90 132 aaKnown RBP16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 FABP12A6NFH5 140 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 AMD1P17707 334 aa16.77■□□□□ 0.27
SMCHD1-201ENST00000320876 AZGP1P25311 298 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms