RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 RIOK2Q9BVS4 552 aaKnown RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 NFKBIL1Q9UBC1 381 aaPredicted RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 SCN8AQ9UQD0 1980 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 VPS26AO75436 327 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 PYGLP06737 847 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 KPNA2P52292 529 aaKnown RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 RPS14P62263 151 aaKnown RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 HABP4Q5JVS0 413 aaKnown RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 CTSL3PQ5NE16 218 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 PIP5KL1Q5T9C9 394 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 PTRHD1Q6GMV3 140 aaKnown RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 NUDCD3Q8IVD9 361 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 RAVER1Q8IY67 606 aaKnown RBP22.36■■□□□ 1.17
IRF3-201ENST00000309877 HDDC3Q8N4P3 179 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 DTX3LQ8TDB6 740 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 FAM136AQ96C01 138 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 NXNL1Q96CM4 212 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 ZSCAN5AQ9BUG6 496 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 P2RY12Q9H244 342 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 ZDHHC3Q9NYG2 299 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 FADS3Q9Y5Q0 445 aa22.36■■□□□ 1.17
IRF3-201ENST00000309877 EYSQ5T1H1 3165 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 E5RI56 91 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 MAN2B1O00754 1011 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 LZTS3O60299 673 aaPredicted RBP22.35■■□□□ 1.17
IRF3-201ENST00000309877 APOA4P06727 396 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 CCDC166P0CW27 439 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 CHRM3P20309 590 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 RPS3P23396 243 aaKnown RBP eCLIP22.35■■□□□ 1.177e-7■■■■□ 25.3
IRF3-201ENST00000309877 DRD3P35462 400 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 COPAP53621 1224 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 TIAL1Q01085 375 aaKnown RBP eCLIP22.35■■□□□ 1.17
IRF3-201ENST00000309877 CSHL1Q14406 222 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 ITIH4Q14624 930 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 AGAP9Q5VTM2 703 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 SPATA6LQ8N4H0 392 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 AADATQ8N5Z0 425 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 TRAM1L1Q8N609 369 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 ZNF75CPQ92670 426 aaPredicted RBP22.35■■□□□ 1.17
IRF3-201ENST00000309877 AP2M1Q96CW1 435 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 COQ10AQ96MF6 247 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 ZNF317Q96PQ6 595 aaPredicted RBP22.35■■□□□ 1.17
IRF3-201ENST00000309877 COPS8Q99627 209 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 BOCQ9BWV1 1114 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 FAM107BQ9H098 131 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 GNPTGQ9UJJ9 305 aa22.35■■□□□ 1.17
IRF3-201ENST00000309877 A0A1W2PQF6 199 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 BIRC5O15392 142 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 MMP20O60882 483 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 BPGMP07738 259 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 LTA4HP09960 611 aaKnown RBP22.34■■□□□ 1.17
IRF3-201ENST00000309877 C6P13671 934 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 TAC1P20366 129 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 CD72P21854 359 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 SLC26A3P40879 764 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 GLRBP48167 497 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 DLG1Q12959 904 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 HENMT1Q5T8I9 393 aaKnown RBP22.34■■□□□ 1.17
IRF3-201ENST00000309877 TRIM42Q8IWZ5 723 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 LRRC34Q8IZ02 419 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 RPLP0P6Q8NHW5 317 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 BCAS4Q8TDM0 211 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 GANCQ8TET4 914 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 HEXDCQ8WVB3 486 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 ABCG8Q9H221 673 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 MANSC1Q9H8J5 431 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 SYTL2Q9HCH5 934 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 MID2Q9UJV3 735 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 NDRG2Q9UN36 371 aaKnown RBP22.34■■□□□ 1.17
IRF3-201ENST00000309877 COQ6Q9Y2Z9 468 aa22.34■■□□□ 1.17
IRF3-201ENST00000309877 ZNF106Q9H2Y7 1883 aaKnown RBP22.34■■□□□ 1.17
IRF3-201ENST00000309877 H3BMM5 538 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 NIPSNAP2O75323 286 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 RNASEH2AO75792 299 aaKnown RBP22.33■■□□□ 1.17
IRF3-201ENST00000309877 DNTTP04053 509 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 CD9P21926 228 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 NSG1P42857 185 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 MLF2Q15773 248 aaPredicted RBP22.33■■□□□ 1.17
IRF3-201ENST00000309877 EOGTQ5NDL2 527 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 LRRC8EQ6NSJ5 796 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 UGT3A1Q6NUS8 523 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 KLC3Q6P597 504 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 CYP2U1Q7Z449 544 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 CPLX4Q7Z7G2 160 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 TMPRSS6Q8IU80 811 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 KCNJ9Q92806 393 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 DTD2Q96FN9 168 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 CCT8L2Q96SF2 557 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 GPR21Q99679 349 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 MECRQ9BV79 373 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 MKRN2Q9H000 416 aaKnown RBP22.33■■□□□ 1.17
IRF3-201ENST00000309877 IGSF5Q9NSI5 407 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 TRMT6Q9UJA5 497 aaKnown RBP22.33■■□□□ 1.17
IRF3-201ENST00000309877 DUSP12Q9UNI6 340 aa22.33■■□□□ 1.17
IRF3-201ENST00000309877 UNC80Q8N2C7 3258 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 A0A1W2PP55 124 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 AP1G1O43747 822 aa22.33■■□□□ 1.16
IRF3-201ENST00000309877 RECQL5O94762 991 aaPredicted RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms