RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 FASLGP48023 281 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 MARCKSL1P49006 195 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 DCDC1P59894 354 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 C19orf57Q0VDD7 668 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 SPA17Q15506 151 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 SLC14A2Q15849 920 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 TFDP3Q5H9I0 405 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 INO80CQ6PI98 192 aaPredicted RBP19.32■□□□□ 0.68
LIME1-201ENST00000309546 CRTC3Q6UUV7 619 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 PCSK4Q6UW60 755 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 ZC3H18Q86VM9 953 aaKnown RBP19.32■□□□□ 0.68
LIME1-201ENST00000309546 ZFAND4Q86XD8 727 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 SFRP1Q8N474 314 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 LSM14AQ8ND56 463 aaKnown RBP19.32■□□□□ 0.68
LIME1-201ENST00000309546 P3H4Q92791 437 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 TADA1Q96BN2 335 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 TEKT5Q96M29 485 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 OR2AG1Q9H205 316 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 CARD9Q9H257 536 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 STN1Q9H668 368 aaKnown RBP19.32■□□□□ 0.68
LIME1-201ENST00000309546 RAD18Q9NS91 495 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 TMEM9Q9P0T7 183 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 KLHL8Q9P2G9 620 aaPredicted RBP19.32■□□□□ 0.68
LIME1-201ENST00000309546 ATXN10Q9UBB4 475 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 TBC1D29Q9UFV1 150 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 ACSL6Q9UKU0 697 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 SSUH2Q9Y2M2 353 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 PCDHA13Q9Y5I0 950 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 HGSO14964 777 aaPredicted RBP19.31■□□□□ 0.68
LIME1-201ENST00000309546 GRID2O43424 1007 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 NUAK1O60285 661 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 C1QL1O75973 258 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 ZNF8P17098 575 aaPredicted RBP19.31■□□□□ 0.68
LIME1-201ENST00000309546 NFKB1P19838 968 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 MAPK9P45984 424 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 LIMK2P53671 638 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 HADHBP55084 474 aaKnown RBP19.31■□□□□ 0.68
LIME1-201ENST00000309546 HHEXQ03014 270 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 ADCY2Q08462 1091 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 SRSF6Q13247 344 aaKnown RBP19.31■□□□□ 0.68
LIME1-201ENST00000309546 NFATC2Q13469 925 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 TAZQ16635 292 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 PLA2G4EQ3MJ16 856 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 TMC3Q7Z5M5 1100 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 PHYKPLQ8IUZ5 450 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 TRAM1L1Q8N609 369 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 OR4D9Q8NGE8 314 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 OR10G6Q8NH81 332 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 ZSCAN5AQ9BUG6 496 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 OSGEPL1Q9H4B0 414 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 SPO11Q9Y5K1 396 aa19.31■□□□□ 0.68
LIME1-201ENST00000309546 FASNP49327 2511 aaKnown RBP19.3■□□□□ 0.68
LIME1-201ENST00000309546 MGAQ8IWI9 3026 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 AHCTF1Q8WYP5 2266 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 hCG_1818297A0A087WSY0 165 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 C9orf172C9J069 976 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 DUX1O43812 170 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 ZRANB2O95218 330 aaKnown RBP eCLIP19.3■□□□□ 0.68
LIME1-201ENST00000309546 BPIP17213 487 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 CYLC1P35663 651 aaPredicted RBP19.3■□□□□ 0.68
LIME1-201ENST00000309546 TNNT3P45378 269 aaPredicted RBP19.3■□□□□ 0.68
LIME1-201ENST00000309546 GPLD1P80108 840 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 CFHR1Q03591 330 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 WASHC5Q12768 1159 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 TMEM164Q5U3C3 297 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 KATNAL2Q8IYT4 538 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 SNRNP27Q8WVK2 155 aaKnown RBP19.3■□□□□ 0.68
LIME1-201ENST00000309546 GLYATL1Q969I3 302 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 HERPUD2Q9BSE4 406 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 BPIFA1Q9NP55 256 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 LUC7LQ9NQ29 371 aaKnown RBP19.3■□□□□ 0.68
LIME1-201ENST00000309546 FAM153AQ9UHL3 310 aa19.3■□□□□ 0.68
LIME1-201ENST00000309546 AURKAO14965 403 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 MTX2O75431 263 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 LCA5LO95447 670 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 THRAP10827 490 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 SLC2A4P14672 509 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 CSTF2P33240 577 aaKnown RBP eCLIP19.29■□□□□ 0.68
LIME1-201ENST00000309546 CD68P34810 354 aaPredicted RBP19.29■□□□□ 0.68
LIME1-201ENST00000309546 TRA2AQ13595 282 aaKnown RBP eCLIP19.29■□□□□ 0.68
LIME1-201ENST00000309546 NOMO1Q15155 1222 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 INSCQ1MX18 579 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 SNAP47Q5SQN1 464 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 MANEAQ5SRI9 462 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.29■□□□□ 0.68
LIME1-201ENST00000309546 C11orf63Q6NUN7 778 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 PID1Q7Z2X4 250 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 ADGRG6Q86SQ4 1221 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 DAAM2Q86T65 1068 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 SLC9B2Q86UD5 537 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 VASH2Q86V25 355 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 CCDC170Q8IYT3 715 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 RCOR2Q8IZ40 523 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 SLC25A41Q8N5S1 370 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 AGBL5Q8NDL9 886 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 KRT35Q92764 455 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 RBM41Q96IZ5 413 aaKnown RBP19.29■□□□□ 0.68
LIME1-201ENST00000309546 DPYSL5Q9BPU6 564 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 TRIM39Q9HCM9 518 aa19.29■□□□□ 0.68
LIME1-201ENST00000309546 KLC4Q9NSK0 619 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms