RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SF3A2Q15428 464 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 BBS9Q3SYG4 887 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 TCEAL6Q6IPX3 200 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 MRNIPQ6NTE8 343 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 IFT20Q8IY31 132 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 PELI3Q8N2H9 469 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 FSTL5Q8N475 847 aaPredicted RBP17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 MINDY1Q8N5J2 469 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 OR6P1Q8NGX9 317 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 OR4L1Q8NH43 312 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 GDAP1Q8TB36 358 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 TCEAL3Q969E4 200 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 HDAC10Q969S8 669 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 DCUN1D1Q96GG9 259 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 EPB41L5Q9HCM4 733 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 PARD6AQ9NPB6 346 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 DNAJC28Q9NX36 388 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 SPASTQ9UBP0 616 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 VPS9D1Q9Y2B5 631 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 RPS6KL1Q9Y6S9 549 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 WDR87Q6ZQQ6 2873 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 TRBV5-4A0A0C4DH59 114 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 PRSS38A1L453 326 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 NEMP2A6NFY4 417 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 BHMG1C9JSJ3 638 aaPredicted RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 QSOX1O00391 747 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 INPP4BO15327 924 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 JUNDP17535 347 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 SDHBP21912 280 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 TTPAP49638 278 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 DHX9Q08211 1270 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 LRP8Q14114 963 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 FRG1Q14331 258 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 ITIH4Q14624 930 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 PTPRCAPQ14761 206 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 ELOCQ15369 112 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 ANKRD20A4Q4UJ75 823 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 FASTKD1Q53R41 847 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 ZRANB3Q5FWF4 1079 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 SPANXN3Q5MJ09 141 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 RNF187Q5TA31 235 aaPredicted RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 NXPE1Q8N323 547 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 DCLK2Q8N568 766 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 EIF1ADQ8N9N8 165 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 FBXO25Q8TCJ0 367 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 CALML6Q8TD86 181 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 COPS8Q99627 209 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 LGR4Q9BXB1 951 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 SMOC1Q9H4F8 434 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 TRNAU1APQ9NX07 287 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 CSNK1G3Q9Y6M4 447 aa17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 EP300Q09472 2414 aaPredicted RBP17.73■□□□□ 0.43
SSSCA1-201ENST00000309328 RIF1Q5UIP0 2472 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 CCDC162PA2VCL2 907 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 TMEM202A6NGA9 273 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 NUAK1O60285 661 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 KCNJ13O60928 360 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ASMTLO95671 621 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 CEACAM5P06731 702 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 GSTM1P09488 218 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 MSH3P20585 1137 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ACRV1P26436 265 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ARSDP51689 593 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 GSTM4Q03013 218 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 EIF2B5Q13144 721 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 KCTD19Q17RG1 926 aaPredicted RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ALG11Q2TAA5 492 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 GPRC6AQ5T6X5 926 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 SDCCAG8Q86SQ7 713 aaPredicted RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 GALNT13Q8IUC8 556 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 PHACTR4Q8IZ21 702 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 MFSD3Q96ES6 412 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ZNF778Q96MU6 729 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 TCF12Q99081 682 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 FGF22Q9HCT0 170 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 CATSPERZQ9NTU4 200 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ZDHHC3Q9NYG2 299 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 ZC3H7BQ9UGR2 993 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 APOBEC3BQ9UH17 382 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 DMGDHQ9UI17 866 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 GPR34Q9UPC5 381 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 TEX264Q9Y6I9 313 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 FAM169AQ9Y6X4 670 aa17.72■□□□□ 0.43
SSSCA1-201ENST00000309328 PLXNA2O75051 1894 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 LAMA1P25391 3075 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 UGT1A9O60656 530 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 CDK14O94921 469 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 AP2A2O94973 939 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 GOT2P00505 430 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 CTSEP14091 401 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 UGT1A6P19224 532 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 OGNP20774 298 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 UGT1A1P22309 533 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 UGT1A4P22310 534 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 NMBRP28336 390 aa17.71■□□□□ 0.43
SSSCA1-201ENST00000309328 EPHA8P29322 1005 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms