RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PTPRRQ15256 657 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 ZRSR2Q15696 482 aaKnown RBP11.68□□□□□ -0.54
SMIM4-201ENST00000307106 PWWP2BQ6NUJ5 590 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 SCYL2Q6P3W7 929 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 ADAMTS17Q8TE56 1095 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 SCAMP4Q969E2 229 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 SNX21Q969T3 373 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 SMAD5Q99717 465 aaKnown RBP11.68□□□□□ -0.54
SMIM4-201ENST00000307106 PDE7BQ9NP56 450 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 ITGB1BP2Q9UKP3 347 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 RARRES3Q9UL19 164 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 SLC30A1Q9Y6M5 507 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 NAV3Q8IVL0 2385 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 PCNX1Q96RV3 2341 aa11.68□□□□□ -0.54
SMIM4-201ENST00000307106 LRRTM2O43300 516 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 KIF1CO43896 1103 aaKnown RBP11.67□□□□□ -0.54
SMIM4-201ENST00000307106 ATP1A1P05023 1023 aaKnown RBP11.67□□□□□ -0.54
SMIM4-201ENST00000307106 PYGLP06737 847 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 GPD1P21695 349 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 TPI1P60174 286 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 UBE2IP63279 158 aaKnown RBP11.67□□□□□ -0.54
SMIM4-201ENST00000307106 PDE1BQ01064 536 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 TUBB3Q13509 450 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 TMCO4Q5TGY1 634 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 CACHD1Q5VU97 1274 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 FAM92BQ6ZTR7 304 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 TMEM26Q6ZUK4 368 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 PRSS42Q7Z5A4 293 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 NOP9Q86U38 636 aaKnown RBP11.67□□□□□ -0.54
SMIM4-201ENST00000307106 EXD1Q8NHP7 514 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 KLHL6Q8WZ60 621 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 SCRN2Q96FV2 425 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 COX14Q96I36 57 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 PLEKHG4BQ96PX9 1271 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 PSKH2Q96QS6 385 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 AGAP2Q99490 1192 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 C11orf70Q9BRQ4 267 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 UCK1Q9HA47 277 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 VPS18Q9P253 973 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 FZD10Q9ULW2 581 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 B3GNT3Q9Y2A9 372 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 ZDHHC9Q9Y397 364 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 COPG1Q9Y678 874 aaKnown RBP11.67□□□□□ -0.54
SMIM4-201ENST00000307106 CCDC168Q8NDH2 2452 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 NF1P21359 2839 aa11.67□□□□□ -0.54
SMIM4-201ENST00000307106 A0A0U1RQS6 177 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 ZG16O60844 167 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 NELFEP18615 380 aaKnown RBP11.66□□□□□ -0.54
SMIM4-201ENST00000307106 MMP8P22894 467 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 RFC1P35251 1148 aaPredicted RBP11.66□□□□□ -0.54
SMIM4-201ENST00000307106 RENBPP51606 427 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 IL10RBQ08334 325 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 RAPSNQ13702 412 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 ARHGAP36Q6ZRI8 547 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 USP45Q70EL2 814 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 GDF7Q7Z4P5 450 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 GLIS1Q8NBF1 620 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 ST6GALNAC3Q8NDV1 305 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 RSC1A1Q92681 617 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 LURAP1Q96LR2 239 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 FCRL4Q96PJ5 515 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
SMIM4-201ENST00000307106 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 C5AR2Q9P296 337 aa11.66□□□□□ -0.54
SMIM4-201ENST00000307106 F5H423 210 aaPredicted RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 DFFAO00273 331 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 CCP110O43303 1012 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 VIPP01282 170 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 KRT3P12035 628 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 CTPS1P17812 591 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 XRCC1P18887 633 aaPredicted RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 ITGA3P26006 1051 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 HNRNPH3P31942 346 aaKnown RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 HTR7P34969 479 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 CAPZBP47756 277 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 AIF1P55008 147 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 TRAF2Q12933 501 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 KCNAB1Q14722 419 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 LBRQ14739 615 aaKnown RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 IZUMO3Q5VZ72 239 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 LRRC66Q68CR7 880 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 MED25Q71SY5 747 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 ZNF765Q7L2R6 523 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 NLRP8Q86W28 1048 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 PHYKPLQ8IUZ5 450 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 TRIM48Q8IWZ4 208 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 TMEM102Q8N9M5 508 aaPredicted RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 SIDT2Q8NBJ9 832 aaKnown RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 MR1Q95460 341 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 ZDHHC12Q96GR4 267 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 TIGD1Q96MW7 591 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 MCCC1Q96RQ3 725 aaPredicted RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 BARD1Q99728 777 aaKnown RBP11.65□□□□□ -0.54
SMIM4-201ENST00000307106 SELENOOQ9BVL4 669 aa11.65□□□□□ -0.54
SMIM4-201ENST00000307106 RMI1Q9H9A7 625 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms