RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 PTGIRP43119 386 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 GLUD2P49448 558 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 MTMR2Q13614 643 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SCARA5Q6ZMJ2 495 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 GDPD1Q8N9F7 314 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TAMM41Q96BW9 452 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 DUS3LQ96G46 650 aaKnown RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 PNMA5Q96PV4 448 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ZCWPW1Q9H0M4 648 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 GDAP2Q9NXN4 497 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SPATA7Q9P0W8 599 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 POMPQ9Y244 141 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TLR6Q9Y2C9 796 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 PCDHGB7Q9Y5F8 929 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 FAM234BA2RU67 622 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ARHGEF33A8MVX0 844 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 PET100P0DJ07 73 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 GSTM2P28161 218 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 CDC25AP30304 524 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SLC12A3P55017 1021 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 STARD3Q14849 445 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 KCTD19Q17RG1 926 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 CARD16Q5EG05 197 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ANO7Q6IWH7 933 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 NLRP8Q86W28 1048 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 DCP2Q8IU60 420 aaKnown RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 HERC6Q8IVU3 1022 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 OR2L5Q8NG80 312 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF606Q8WXB4 792 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 KCTD12Q96CX2 325 aaKnown RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TMEM176AQ96HP8 235 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF607Q96SK3 696 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SLC4A5Q9BY07 1137 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 CST11Q9H112 138 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SAV1Q9H4B6 383 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TMEM39AQ9NV64 488 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SETD4Q9NVD3 440 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ARL15Q9NXU5 204 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TBC1D14Q9P2M4 693 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TDRKHQ9Y2W6 561 aaKnown RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 MYH2Q9UKX2 1941 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 FAM170BA6NMN3 283 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 M0R129 80 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SLC19A2O60779 497 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ODC1P11926 461 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 EPCAMP16422 314 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF3P17036 446 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 BGNP21810 368 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 STOMP27105 288 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SCNN1GP51170 649 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 CEBPGP53567 150 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 MERTKQ12866 999 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 WDR72Q3MJ13 1102 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 RETSATQ6NUM9 610 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 DHRS4L2Q6PKH6 230 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ADGRD2Q7Z7M1 963 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 C4orf32Q8N8J7 132 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ASCC1Q8N9N2 400 aaKnown RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 USP7Q93009 1102 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 FBXL18Q96ME1 805 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 PRICKLE1Q96MT3 831 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 RNF157Q96PX1 679 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 FAM49AQ9H0Q0 323 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ETNK2Q9NVF9 386 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 KLQ9UEF7 1012 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 CNTN6Q9UQ52 1028 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF99A8MXY4 864 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 LRG1P02750 347 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 TCN1P20061 433 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 IL4RP24394 825 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 DPP6P42658 865 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 KCNC3Q14003 757 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 PLEKHN1Q494U1 663 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SLC25A25Q6KCM7 469 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 FAM171BQ6P995 826 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 C14orf80Q86SX3 495 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 MCEMP1Q8IX19 187 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 ZSWIM2Q8NEG5 633 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 JPH3Q8WXH2 748 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-201ENST00000303395 MED30Q96HR3 178 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 HSD3B7Q9H2F3 369 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 DYRK1BQ9Y463 629 aa5.22□□□□□ -1.57
SCN1A-201ENST00000303395 SVILO95425 2214 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 TTC34A8MYJ7 566 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 FAM20BO75063 409 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 ENTPD5O75356 428 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 SNCGO76070 127 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 PRKD3O94806 890 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 NTSR2O95665 410 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 TYRP14679 529 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 VAC14Q08AM6 782 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 MAB21L1Q13394 359 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 GRM2Q14416 872 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 SPCS2Q15005 226 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 KIF18BQ86Y91 864 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 FAM160A2Q8N612 972 aaPredicted RBP5.21□□□□□ -1.57
SCN1A-201ENST00000303395 ATG16L2Q8NAA4 619 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 CHFRQ96EP1 664 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 HYLS1Q96M11 299 aa5.21□□□□□ -1.57
SCN1A-201ENST00000303395 HEMGNQ9BXL5 484 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms