RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SERPINA4P29622 427 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PTGER3P43115 390 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CACNG1Q06432 222 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PSAPL1Q6NUJ1 521 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 SYCE2Q6PIF2 218 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 FRMD7Q6ZUT3 714 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 TAS2R42Q7RTR8 314 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PIANPQ8IYJ0 282 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PHTF2Q8N3S3 785 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 STAG3L4Q8TBR4 150 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 FGF13Q92913 245 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PTERQ96BW5 349 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 L3HYPDHQ96EM0 354 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 TTC1Q99614 292 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 DERL2Q9GZP9 239 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 TNKS2Q9H2K2 1166 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 MED16Q9Y2X0 877 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 DOCK8Q8NF50 2099 aa9.09□□□□□ -0.96
PDPN-201ENST00000294489 TRBV5-4A0A0C4DH59 114 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SLC22A2O15244 555 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 CIB2O75838 187 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 TM7SF2O76062 418 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 ADH1CP00326 375 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 RAP1GDS1P52306 607 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 HERVK_113P63132 956 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 KLF10Q13118 480 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 E2F5Q15329 346 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SETMARQ53H47 684 aaPredicted RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 ZNF678Q5SXM1 525 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 PAQR3Q6TCH7 311 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 CERS6Q6ZMG9 384 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 CUZD1Q86UP6 607 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SCUBE1Q8IWY4 988 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 POU5F2Q8N7G0 328 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 OR2A12Q8NGT7 310 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 BPIFB1Q8TDL5 484 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 EXT2Q93063 718 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 RPL10LQ96L21 214 aaKnown RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 FAM161BQ96MY7 647 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 ASB2Q96Q27 587 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 THTPAQ9BU02 230 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 ERVK-6Q9BXR3 956 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 RNPEPL1Q9HAU8 725 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 MRGBPQ9NV56 204 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 NOP53Q9NZM5 478 aaKnown RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 TRMT6Q9UJA5 497 aaKnown RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 L3MBTL1Q9Y468 752 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 LOC100653049A0A140TA62 436 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SYCE1LA8MT33 242 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 AGAP14A8MT82 685 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 E5RI56 91 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 KRT34O76011 436 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 ESR1P03372 595 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 ALPIP09923 528 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 GFAPP14136 432 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SP100P23497 879 aaPredicted RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 ADSLP30566 484 aaPredicted RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 HNF1BP35680 557 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 KCNC1P48547 511 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 CDKN1CP49918 316 aaPredicted RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 SATB1Q01826 763 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 FCHO2Q0JRZ9 810 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 NAA25Q14CX7 972 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 PTPRRQ15256 657 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 GEN1Q17RS7 908 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 UGT3A1Q6NUS8 523 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 CEP70Q8NHQ1 597 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 KIAA1191Q96A73 305 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SCRN2Q96FV2 425 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 BIRC8Q96P09 236 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 GPR21Q99679 349 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 S1PR5Q9H228 398 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 P2RY12Q9H244 342 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 SUV39H2Q9H5I1 410 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 DCLRE1BQ9H816 532 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 RNF112Q9ULX5 631 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 FIS1Q9Y3D6 152 aa9.08□□□□□ -0.96
PDPN-201ENST00000294489 OAS3Q9Y6K5 1087 aaKnown RBP9.08□□□□□ -0.96
PDPN-201ENST00000294489 C1orf232A0A0U1RR37 186 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 KERAO60938 352 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PEX11AO75192 247 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 ENTPD5O75356 428 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 THRAP10827 490 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 COX4I1P13073 169 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 BMP1P13497 986 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 CHRM3P20309 590 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 VIPR2P41587 438 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 CCNHP51946 323 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 ADAM15Q13444 863 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PDGFRLQ15198 375 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 RARS2Q5T160 578 aaKnown RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 C12orf40Q86WS4 652 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 SPNS2Q8IVW8 549 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 PTGR2Q8N8N7 351 aaPredicted RBP9.07□□□□□ -0.96
PDPN-201ENST00000294489 FBXO27Q8NI29 283 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 DTX3LQ8TDB6 740 aa9.07□□□□□ -0.96
PDPN-201ENST00000294489 KCNJ9Q92806 393 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms