RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 CENPUQ71F23 418 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 OR56A4Q8NGH8 313 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
CCDC42-201ENST00000293845 ULK4Q96C45 1275 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
CCDC42-201ENST00000293845 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
CCDC42-201ENST00000293845 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 VPS18Q9P253 973 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
CCDC42-201ENST00000293845 RPS6KL1Q9Y6S9 549 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 DGKBQ9Y6T7 804 aa13.12□□□□□ -0.31
CCDC42-201ENST00000293845 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
CCDC42-201ENST00000293845 ARHGEF17Q96PE2 2063 aaPredicted RBP13.12□□□□□ -0.31
CCDC42-201ENST00000293845 GPR89AB7ZAQ6 455 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 GFRA3O60609 400 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A9O60656 530 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 SLC25A14O95258 325 aaPredicted RBP13.11□□□□□ -0.31
CCDC42-201ENST00000293845 CER1O95813 267 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 CSF2P04141 144 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 CEACAM5P06731 702 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 POLBP06746 335 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 IVLP07476 585 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 GPR89BP0CG08 455 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 NME1P15531 152 aaKnown RBP13.11□□□□□ -0.31
CCDC42-201ENST00000293845 PAMP19021 973 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A6P19224 532 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A1P22309 533 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A4P22310 534 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A3P35503 534 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A5P35504 534 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 ELK3P41970 407 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
CCDC42-201ENST00000293845 ALG11Q2TAA5 492 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 HLA-BQ31612 363 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 LDLRAP1Q5SW96 308 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 GPRC6AQ5T6X5 926 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 PSAPL1Q6NUJ1 521 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 ENPP7Q6UWV6 458 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 CES3Q6UWW8 571 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 TRIM74Q86UV6 250 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 IGDCC3Q8IVU1 814 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 NXPE1Q8N323 547 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 OR4L1Q8NH43 312 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 FCRL3Q96P31 734 aaPredicted RBP13.11□□□□□ -0.31
CCDC42-201ENST00000293845 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 TRIM56Q9BRZ2 755 aaKnown RBP13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 FGF22Q9HCT0 170 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 CRLS1Q9UJA2 301 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 PNMA8BQ9ULN7 279 aaPredicted RBP13.11□□□□□ -0.31
CCDC42-201ENST00000293845 CHMP2BQ9UQN3 213 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 FAM169AQ9Y6X4 670 aa13.11□□□□□ -0.31
CCDC42-201ENST00000293845 FRYLO94915 3013 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 IGLV3-16A0A075B6K0 115 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 A0A1B0GTQ1 180 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 PRSS38A1L453 326 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 OR51F1A6NGY5 319 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 YKT6O15498 198 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 VEGFDO43915 354 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ZNF883P0CG24 379 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ACRV1P26436 265 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ARRB1P49407 418 aaPredicted RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 BLKP51451 505 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 SRP54P61011 504 aaKnown RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 PPARDQ03181 441 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 CRYMQ14894 314 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 FASTKD3Q14CZ7 662 aaKnown RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 KHDC1Q4VXA5 237 aaKnown RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ZRANB3Q5FWF4 1079 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 SPANXN3Q5MJ09 141 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 STEAP4Q687X5 459 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ADGRG6Q86SQ4 1221 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 PIANPQ8IYJ0 282 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 FBXO36Q8NEA4 188 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 OR6P1Q8NGX9 317 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 OR1E3Q8WZA6 343 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 PDXPQ96GD0 296 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 EDEM2Q9BV94 578 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ZCCHC2Q9C0B9 1178 aaKnown RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 GAREM1Q9H706 876 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ZC3H7BQ9UGR2 993 aaKnown RBP13.1□□□□□ -0.31
CCDC42-201ENST00000293845 BPTFQ12830 3046 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 LAMA1P25391 3075 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 ZNF292O60281 2723 aa13.1□□□□□ -0.31
CCDC42-201ENST00000293845 H3BM21 787 aa13.09□□□□□ -0.31
CCDC42-201ENST00000293845 CHUKO15111 745 aa13.09□□□□□ -0.31
CCDC42-201ENST00000293845 NUAK1O60285 661 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms