RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 CPA2P48052 419 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 INHBCP55103 352 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 KCNC3Q14003 757 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 PDCD2Q16342 344 aaPredicted RBP10.1□□□□□ -0.79
C9orf43-201ENST00000288462 GEN1Q17RS7 908 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 EML3Q32P44 896 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 LSM12Q3MHD2 195 aaKnown RBP10.1□□□□□ -0.79
C9orf43-201ENST00000288462 GPR33Q49SQ1 333 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 ACCSLQ4AC99 568 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 LRRC66Q68CR7 880 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 ACAD11Q709F0 780 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 TMPRSS6Q8IU80 811 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 RBFAQ8N0V3 343 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 PHTF2Q8N3S3 785 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 CHST14Q8NCH0 376 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 STAG3L4Q8TBR4 150 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 OSCP1Q8WVF1 389 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 EXT2Q93063 718 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 FUBP1Q96AE4 644 aaKnown RBP10.1□□□□□ -0.79
C9orf43-201ENST00000288462 OSBPL1AQ9BXW6 950 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 C1orf21Q9H246 121 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 WDR55Q9H6Y2 383 aaPredicted RBP10.1□□□□□ -0.79
C9orf43-201ENST00000288462 ASB8Q9H765 288 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 SFXN1Q9H9B4 322 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 PIDD1Q9HB75 910 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 TNFRSF12AQ9NP84 129 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 GTSE1Q9NYZ3 720 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 RNF112Q9ULX5 631 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 PLA2G4CQ9UP65 541 aa10.1□□□□□ -0.79
C9orf43-201ENST00000288462 NPEPPSL1A6NEC2 478 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SYCE1LA8MT33 242 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 B2RBV5 119 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CDC7O00311 574 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 NEMP1O14524 444 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 UBFD1O14562 309 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 TRIM24O15164 1050 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SLC22A2O15244 555 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 ECI2O75521 394 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CISD3P0C7P0 127 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CHRM1P11229 460 aaPredicted RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 ADH5P11766 374 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 ZNF7P17097 686 aaPredicted RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 POLR2EP19388 210 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 EPHA3P29320 983 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 IL2P60568 153 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 KDSRQ06136 332 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 NAA25Q14CX7 972 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SHHQ15465 462 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 TSNQ15631 228 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CHRNA6Q15825 494 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 TCEAL5Q5H9L2 206 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 UGT3A1Q6NUS8 523 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 GDPD4Q6W3E5 623 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 RPS27LQ71UM5 84 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 RAB44Q7Z6P3 723 aaPredicted RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 NPAS3Q8IXF0 933 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 AFAP1L2Q8N4X5 818 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CPSF7Q8N684 471 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 C12orf76Q8N812 135 aaPredicted RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 RBM15BQ8NDT2 890 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 VN1R2Q8NFZ6 395 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 FBXO27Q8NI29 283 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 WFIKKN2Q8TEU8 576 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CCDC97Q96F63 343 aaPredicted RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 LINGO1Q96FE5 620 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 PDLIM5Q96HC4 596 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 ASB2Q96Q27 587 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 C1QTNF3Q9BXJ4 246 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CLPBQ9H078 707 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 DUS2Q9NX74 493 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 GNPTGQ9UJJ9 305 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 TMCO1Q9UM00 188 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 DHRS7Q9Y394 339 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 WASF2Q9Y6W5 498 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 GOLGA8QA0A0J9YX86 632 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 GOLGA8OA6NCC3 632 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 GOLGA8CPA6NN73 597 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SUPT3HB4E1H0 165 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 E5RI56 91 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 GOLGA8NF8WBI6 632 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 STX16-NPEPL1H3BU86 382 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 BTN3A1O00481 513 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 STX16O14662 325 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 DCXO43602 365 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 BNIP3LO60238 219 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SUPT3HO75486 399 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SUPT7LO94864 414 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 ADH1CP00326 375 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 ASLP04424 464 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 SRPRAP08240 638 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 RPS17P08708 135 aaKnown RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 C1SP09871 688 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 NCF2P19878 526 aaPredicted RBP10.09□□□□□ -0.79
C9orf43-201ENST00000288462 CPOXP36551 454 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 BTKQ06187 659 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 KLF10Q13118 480 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 DNAL1Q4LDG9 190 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 BRAT1Q6PJG6 821 aa10.09□□□□□ -0.79
C9orf43-201ENST00000288462 TMC5Q6UXY8 1006 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms