RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TMEM120BA0PK00 339 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 PRR23AA6NEV1 266 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 FAM47DPA6NHR8 397 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 PI15O43692 258 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 ZNF217O75362 1048 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 MT-ND3P03897 115 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 KRT4P19013 534 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 PTGER3P43115 390 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 CXCL12P48061 93 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 DNAJC3Q13217 504 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 MPP2Q14168 576 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 DBN1Q16643 649 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 TIFABQ6ZNK6 161 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 OR2T34Q8NGX1 318 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 MDM1Q8TC05 714 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 SMC6Q96SB8 1091 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 GPR22Q99680 433 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 SSU72Q9NP77 194 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 LRRC72A6NJI9 287 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 FADS2P1A8MWK0 482 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 PRPF4O43172 522 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 RFPL1O75677 317 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 OXTRP30559 389 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 POLD2P49005 469 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 CLCN5P51795 746 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 ADARP55265 1226 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 PPARDQ03181 441 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 SGCGQ13326 291 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 TMEM31Q5JXX7 168 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 DCLK2Q8N568 766 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 VPS35Q96QK1 796 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 SLC17A9Q9BYT1 436 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 TMPRSS11EQ9UL52 423 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 CORO1CQ9ULV4 474 aaPredicted RBP18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 CYP8B1Q9UNU6 501 aa18.76■□□□□ 0.59
PDLIM3-202ENST00000284770 PLXNA2O75051 1894 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 TYROBPO43914 113 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 OR1I1O60431 355 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 PAK4O96013 591 aaPredicted RBP18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 SOD1P00441 154 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 AOC1P19801 751 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 CCR3P51677 355 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 SLC18A2Q05940 514 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 FGL2Q14314 439 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 RBFAQ8N0V3 343 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 BTN2A2Q8WVV5 523 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 ZDHHC3Q9NYG2 299 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 LRRK1Q38SD2 2015 aa18.75■□□□□ 0.59
PDLIM3-202ENST00000284770 FAM95CA0A1B0GW59 222 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 UBA6A0AVT1 1052 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 SEMA4FO95754 770 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ALDOAP04075 364 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 CHN1P15882 459 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ZNF7P17097 686 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 MDH1P40925 334 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 SLC18A1P54219 525 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ITIH4Q14624 930 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 LRRC14Q15048 493 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 WSCD2Q2TBF2 565 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 GPRC6AQ5T6X5 926 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 RAET1GQ6H3X3 334 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 TRIM69Q86WT6 500 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 PELI3Q8N2H9 469 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 GPATCH11Q8N954 259 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 BANPQ8N9N5 519 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ACVR1CQ8NER5 493 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ASB12Q8WXK4 309 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ISL2Q96A47 359 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 ALKBH8Q96BT7 664 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 KLF6Q99612 283 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 COPS8Q99627 209 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 TPSD1Q9BZJ3 242 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 KCNK9Q9NPC2 374 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 SLC39A10Q9ULF5 831 aa18.74■□□□□ 0.59
PDLIM3-202ENST00000284770 IGLV3-16A0A075B6K0 115 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 GOLGA8RI6L899 631 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 K7ESM1 405 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 PRMT5O14744 637 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 SPAG7O75391 227 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 PYGLP06737 847 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 CD6P30203 668 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 CCNFP41002 786 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 GPR1P46091 355 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 PPP2CBP62714 309 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 PPP2CAP67775 309 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 GUCY1A3Q02108 690 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 RBM20Q5T481 1227 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 ZNF549Q6P9A3 640 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 KLK6Q92876 244 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 GLYATL1Q969I3 302 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 TOE1Q96GM8 510 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 BIRC8Q96P09 236 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 BOCQ9BWV1 1114 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 C1QTNF7Q9BXJ2 289 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 P2RY12Q9H244 342 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 WSB2Q9NYS7 404 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 SMG5Q9UPR3 1016 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 C10orf142B7Z368 130 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 K7ESF4 209 aa18.73■□□□□ 0.59
PDLIM3-202ENST00000284770 SHOX2O60902 331 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms