RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 COPAP53621 1224 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SATB1Q01826 763 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 BTKQ06187 659 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GPM6BQ13491 265 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TSNQ15631 228 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CHRNA6Q15825 494 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 LYPLAL1Q5VWZ2 237 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TMEM215Q68D42 235 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 NXNQ6DKJ4 435 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GRAMD4Q6IC98 578 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ELMSAN1Q6PJG2 1045 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SNX20Q7Z614 316 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 RBM23Q86U06 439 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TSPAN33Q86UF1 283 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PLPP6Q8IY26 295 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 NAT16Q8N8M0 369 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CEP70Q8NHQ1 597 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GIMAP7Q8NHV1 300 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ACTRT2Q8TDY3 377 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ING5Q8WYH8 240 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 LENG8Q96PV6 779 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ASB2Q96Q27 587 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TTC1Q99614 292 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 LBHD1Q9BQE6 289 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 THTPAQ9BU02 230 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 MCOLN1Q9GZU1 580 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 G3BP2Q9UN86 482 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ERVW-1Q9UQF0 538 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 MRPS23Q9Y3D9 190 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GLYATL1P3A0A0U1RQE8 302 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 RGSL1A5PLK6 1076 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 NPIPB15A6NHN6 443 aaPredicted RBP9.51□□□□□ -0.89
TRIM55-201ENST00000276573 LRRC14BA6NHZ5 514 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SYCE1LA8MT33 242 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 IQCF5A8MTL0 148 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SUPT3HB4E1H0 165 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 WASH3PC4AMC7 463 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 E5RI56 91 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SLC22A2O15244 555 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 PEX11AO75192 247 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SUPT3HO75486 399 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 ECI2O75521 394 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SIX3O95343 332 aaPredicted RBP9.51□□□□□ -0.89
TRIM55-201ENST00000276573 PRAMEF1O95521 474 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 FGF4P08620 206 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 THRAP10827 490 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 GFAPP14136 432 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 POLR2EP19388 210 aaKnown RBP9.51□□□□□ -0.89
TRIM55-201ENST00000276573 ITGALP20701 1170 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 RPS3P23396 243 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM55-201ENST00000276573 PIK3R1P27986 724 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SPAM1P38567 509 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 CDH13P55290 713 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SLC25A3Q00325 362 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 NFATC2Q13469 925 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 GPR33Q49SQ1 333 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 TMEM198Q66K66 360 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 SCUBE1Q8IWY4 988 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 CLYBLQ8N0X4 340 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 FBXO39Q8N4B4 442 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 ITFG1Q8TB96 612 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 FUBP1Q96AE4 644 aaKnown RBP9.51□□□□□ -0.89
TRIM55-201ENST00000276573 PDLIM5Q96HC4 596 aaKnown RBP9.51□□□□□ -0.89
TRIM55-201ENST00000276573 LRRC3BQ96PB8 259 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 ZDHHC6Q9H6R6 413 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 MEAF6Q9HAF1 191 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 FBXO10Q9UK96 956 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 FIS1Q9Y3D6 152 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 MYOFQ9NZM1 2061 aa9.51□□□□□ -0.89
TRIM55-201ENST00000276573 A0A1W2PQ67 120 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 NPEPPSL1A6NEC2 478 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 AGAP14A8MT82 685 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 BTN3A1O00481 513 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 TRIM24O15164 1050 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 KLK8O60259 260 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 ENTPD5O75356 428 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 CDK14O94921 469 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 CA3P07451 260 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 INHBCP55103 352 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 ERVK-21P61565 698 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 SH3BP2P78314 561 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 SEMG2Q02383 582 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 PTSQ03393 145 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 UGT3A2Q3SY77 523 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 PTRHD1Q6GMV3 140 aaKnown RBP9.5□□□□□ -0.89
TRIM55-201ENST00000276573 FAM109BQ6ICB4 259 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-201ENST00000276573 GDPD4Q6W3E5 623 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 Q6ZVU0 165 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 ADGRD2Q7Z7M1 963 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 GPSM1Q86YR5 675 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 CPNE9Q8IYJ1 553 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 RBFAQ8N0V3 343 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 CELF5Q8N6W0 485 aaKnown RBP9.5□□□□□ -0.89
TRIM55-201ENST00000276573 CHST14Q8NCH0 376 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 GPR26Q8NDV2 337 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 OR2A12Q8NGT7 310 aa9.5□□□□□ -0.89
TRIM55-201ENST00000276573 MYLIPQ8WY64 445 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms