RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NUDT18Q6ZVK8 323 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 HSD11B1LQ7Z5J1 315 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 SUGP1Q8IWZ8 645 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 RAVER1Q8IY67 606 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 TXNDC5Q8NBS9 432 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 PIP4K2CQ8TBX8 421 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 CCT6BQ92526 530 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 ARRDC3Q96B67 414 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 THOC1Q96FV9 657 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 RMDN2Q96LZ7 410 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 SLC30A3Q99726 388 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 UNKQ9C0B0 810 aaKnown RBP16.24■□□□□ 0.19
TPM1-201ENST00000267996 DERL2Q9GZP9 239 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 KCNK13Q9HB14 408 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 RAD18Q9NS91 495 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 GALPQ9UBC7 116 aa16.24■□□□□ 0.19
TPM1-201ENST00000267996 PLXNB3Q9ULL4 1909 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 IGLV3-16A0A075B6K0 115 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 ANTXRLA6NF34 631 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 KPNA3O00505 521 aaPredicted RBP16.23■□□□□ 0.19
TPM1-201ENST00000267996 SPINT1O43278 529 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 ZBTB14O43829 449 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 XPAP23025 273 aaPredicted RBP16.23■□□□□ 0.19
TPM1-201ENST00000267996 TNFRSF4P43489 277 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 CLCN7P51798 805 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 ATP13A5Q4VNC0 1218 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 ERAP2Q6P179 960 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 MACC1Q6ZN28 852 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 TRPM8Q7Z2W7 1104 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 TECPR1Q7Z6L1 1165 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 GIMAP7Q8NHV1 300 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 RHEBL1Q8TAI7 183 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 CD200R1Q8TD46 325 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 PTERQ96BW5 349 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 ULK4Q96C45 1275 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 CCDC97Q96F63 343 aaPredicted RBP16.23■□□□□ 0.19
TPM1-201ENST00000267996 ACOX2Q99424 681 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 BOCQ9BWV1 1114 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 CLPBQ9H078 707 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 CDH19Q9H159 772 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 TFB2MQ9H5Q4 396 aaKnown RBP16.23■□□□□ 0.19
TPM1-201ENST00000267996 PRSS16Q9NQE7 514 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 SMOXQ9NWM0 555 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 ZDHHC3Q9NYG2 299 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 TRMT6Q9UJA5 497 aaKnown RBP16.23■□□□□ 0.19
TPM1-201ENST00000267996 TMPRSS11EQ9UL52 423 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 DHRS7Q9Y394 339 aa16.23■□□□□ 0.19
TPM1-201ENST00000267996 CCDC189A1A4V9 331 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 H3BMM5 538 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 PSMD11O00231 422 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 AREL1O15033 823 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 NPC1O15118 1278 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 LYPLA1O75608 230 aaPredicted RBP16.22■□□□□ 0.19
TPM1-201ENST00000267996 TSPAN12O95859 305 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 IGFBP4P22692 258 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 KCNC1P48547 511 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 GALK1P51570 392 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 METAP1P53582 386 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 ATP6V0D1P61421 351 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 ASPHQ12797 758 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 POM121L1PQ3SYA9 428 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 UGT3A1Q6NUS8 523 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 LIPIQ6XZB0 460 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 NKAPQ8N5F7 415 aaKnown RBP16.22■□□□□ 0.19
TPM1-201ENST00000267996 FAM136AQ96C01 138 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 CCDC126Q96EE4 140 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 DRC3Q9H069 523 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 ALG9Q9H6U8 611 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 TRPV5Q9NQA5 729 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 GNPTGQ9UJJ9 305 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 PLXNA2O75051 1894 aa16.22■□□□□ 0.19
TPM1-201ENST00000267996 TRIOBPQ9H2D6 2365 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 GRXCR2A6NFK2 248 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 GOLGA8CPA6NN73 597 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 H0Y858 1186 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 SOX9P48436 509 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 E2F5Q15329 346 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 Q6ZVL8 140 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 DSG4Q86SJ6 1040 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 MICALL1Q8N3F8 863 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 KIAA1191Q96A73 305 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 PDLIM5Q96HC4 596 aaKnown RBP16.21■□□□□ 0.19
TPM1-201ENST00000267996 P2RY13Q9BPV8 354 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 KDM4CQ9H3R0 1056 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 FAM83DQ9H4H8 585 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 ABCF3Q9NUQ8 709 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 CACNA2D2Q9NY47 1150 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 KCNK4Q9NYG8 393 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 HAO1Q9UJM8 370 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 DCTN4Q9UJW0 460 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 DNAJC16Q9Y2G8 782 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 PRSS21Q9Y6M0 314 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 TICRRQ7Z2Z1 1910 aa16.21■□□□□ 0.19
TPM1-201ENST00000267996 A8MT66 165 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 F8W8V4 182 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 K7EQS6 105 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 EPHX1P07099 455 aa16.21■□□□□ 0.18
TPM1-201ENST00000267996 GM2AP17900 193 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms