RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 URGCPQ8TCY9 931 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PHF10Q8WUB8 498 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 TMEM174Q8WUU8 243 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PYCR2Q96C36 320 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 GPRASP2Q96D09 838 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TOE1Q96GM8 510 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 CPXM1Q96SM3 734 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ZMAT5Q9UDW3 170 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 LEUTXA8MZ59 168 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 LINC01387J3KSC0 135 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TSPAN1O60635 241 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 CHRNA1P02708 482 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ALBP02768 609 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TP53P04637 393 aaPredicted RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 SUPT20HL2P0C7V6 817 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TSPAN8P19075 237 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SFNP31947 248 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 MASP1P48740 699 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 GBE1Q04446 702 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 EIF2B5Q13144 721 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 NAB1Q13506 487 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 INSCQ1MX18 579 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 BCL7AQ4VC05 210 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 RABL3Q5HYI8 236 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 STEAP4Q687X5 459 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TAS1R3Q7RTX0 852 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 NT5DC4Q86YG4 428 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PARP16Q8N5Y8 322 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 TRPV3Q8NET8 790 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 SLC7A14Q8TBB6 771 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ERVK-18Q9QC07 812 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 UTS2RQ9UKP6 389 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 FBXO5Q9UKT4 447 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 ZNF638Q14966 1978 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 DOCK1Q14185 1865 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 PHIPQ8WWQ0 1821 aa8.73□□□□□ -1.01
VAPB-201ENST00000265619 MKI67P46013 3256 aaKnown RBP8.73□□□□□ -1.01
VAPB-201ENST00000265619 TCRBV5S2A0A599 114 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 TTC24A2A3L6 582 aaPredicted RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 KRT87PA6NCN2 255 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CXCL11O14625 94 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 DLX3O60479 287 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 KRT6AP02538 564 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 KRT6BP04259 564 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 KRT7P08729 469 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 ZNF250P15622 560 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 M6PRP20645 277 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 PSMA4P25789 261 aaKnown RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 IL12AP29459 219 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 MAGEA12P43365 314 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 DSC3Q14574 896 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 VPS26BQ4G0F5 336 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 B3GNT9Q6UX72 402 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CYHR1Q6ZMK1 362 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 ARMCX2Q7L311 632 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 STRA8Q7Z7C7 330 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 PCDH19Q8TAB3 1148 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 SH3KBP1Q96B97 665 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 GPR78Q96P69 363 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 MBOAT4Q96T53 435 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 SDHCQ99643 169 aaPredicted RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 ROGDIQ9GZN7 287 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 C6orf62Q9GZU0 229 aaPredicted RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 PDE10AQ9Y233 779 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 AKT3Q9Y243 479 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 ZNF99A8MXY4 864 aaPredicted RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 K7ERI5 159 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 FXYD1O00168 92 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 HOXA2O43364 376 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CALB1P05937 261 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CYP2A7P20853 494 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 IL10P22301 178 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CNTFP26441 200 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 S100A5P33763 92 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 MAGEA6P43360 314 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 LAPTM5Q13571 262 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 GRM3Q14832 879 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 C6orf132Q5T0Z8 1188 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 CES5AQ6NT32 575 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 NRARPQ7Z6K4 114 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 MCFD2Q8NI22 146 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 AFG1LQ8WV93 481 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 KCTD4Q8WVF5 259 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 PROX1Q92786 737 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 YIPF6Q96EC8 236 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 ASB2Q96Q27 587 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 FTHL17Q9BXU8 183 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 TRIP11Q15643 1979 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 SLC22A2O15244 555 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 SNRPB2P08579 225 aaKnown RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 ALDOCP09972 364 aaKnown RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 TGFB3P10600 412 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 ACVR2AP27037 513 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms