RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SOD1P00441 154 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 GYPCP04921 128 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 VCLP18206 1134 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 PTMSP20962 102 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 KDELR1P24390 212 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 UGT1A3P35503 534 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 TSPAN7P41732 249 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 CCR10P46092 362 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 TAS2R40P59535 323 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 FOXM1Q08050 763 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 TRIM14Q14142 442 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 KIR2DS5Q14953 304 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
TRAF4-202ENST00000262396 SLC18A3Q16572 532 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 PLA2G4EQ3MJ16 856 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 LINC00303Q3SY05 128 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 IYDQ6PHW0 289 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 CRTC3Q6UUV7 619 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 NT5DC3Q86UY8 548 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 DTX1Q86Y01 620 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 PLXDC1Q8IUK5 500 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 NLGN4XQ8N0W4 816 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 NLGN4YQ8NFZ3 816 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-202ENST00000262396 OR8K1Q8NGG5 319 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 FATE1Q969F0 183 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 NKD1Q969G9 470 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 COX14Q96I36 57 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 CCDC42Q96M95 316 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 RNF157Q96PX1 679 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 ZPBPQ9BS86 351 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 ZSCAN5AQ9BUG6 496 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 CARD9Q9H257 536 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 EPB41L1Q9H4G0 881 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 SARS2Q9NP81 518 aaKnown RBP12.12□□□□□ -0.47
TRAF4-202ENST00000262396 KLC4Q9NSK0 619 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 DTLQ9NZJ0 730 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 TBC1D29Q9UFV1 150 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 DNAJC16Q9Y2G8 782 aa12.12□□□□□ -0.47
TRAF4-202ENST00000262396 LRP4O75096 1905 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 ZNF462Q96JM2 2506 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 SPOPO43791 374 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 DNAJC6O75061 913 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 PIRTP0C851 137 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 PRKAR1AP10644 381 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 F3P13726 295 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 LIFP15018 202 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 MAP4P27816 1152 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 CSF2RBP32927 897 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 PBX1P40424 430 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 ARSEP51690 589 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 EPHA4P54764 986 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 NFKB2Q00653 900 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 SQSTM1Q13501 440 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 HENMT1Q5T8I9 393 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 ALG1LQ6GMV1 187 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 WDR74Q6RFH5 385 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 LRRTM4Q86VH4 590 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 ARRDC2Q8TBH0 407 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 FAM71BQ8TC56 605 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 LYSMD1Q96S90 227 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 SRPK1Q96SB4 655 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 TRIT1Q9H3H1 467 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 TRIM39Q9HCM9 518 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 PRDM8Q9NQV8 689 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 CPNE7Q9UBL6 633 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 ST14Q9Y5Y6 855 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
TRAF4-202ENST00000262396 MGAQ8IWI9 3026 aa12.11□□□□□ -0.47
TRAF4-202ENST00000262396 KALRNO60229 2985 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 FADS2P1A8MWK0 482 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 KMOO15229 486 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 NUAK1O60285 661 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 PRLP01236 227 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 TMEM253P0C7T8 217 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 ZNF8P17098 575 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-202ENST00000262396 TYRP1P17643 537 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 HALP42357 657 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 MC1RQ01726 317 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 CDK18Q07002 472 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 PPIDQ08752 370 aaKnown RBP12.1□□□□□ -0.47
TRAF4-202ENST00000262396 SEPT6Q14141 434 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-202ENST00000262396 ZNF648Q5T619 568 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-202ENST00000262396 C16orf46Q6P387 395 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 CPNE8Q86YQ8 564 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 RASGRP3Q8IV61 690 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 RHOT2Q8IXI1 618 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 TRAM1L1Q8N609 369 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 PQLC3Q8N755 202 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 SLC35G2Q8TBE7 412 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 PMEPA1Q969W9 287 aa12.1□□□□□ -0.47
TRAF4-202ENST00000262396 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms